BAC Information

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BAC

Clone NameB6Ng01-330F05
Chromosome13 (Build37)
Map Location 101,438,974 - 101,607,364
singlet/doubletdoublet
Overlap geneCcdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5
Upstream geneCartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9
Downstream geneLOC619865, LOC619917, EG619937, 4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330F05.bB6Ng01-330F05.g
ACCGA117035GA117036
length1,001148
definitionB6Ng01-330F05.b B6Ng01-330F05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,438,974 - 101,439,973)(101,607,217 - 101,607,364)
sequence
gaattcacacagccactcctggaagtagtgcactagtttcaacacaggta
tagaatcacgtagctaggtgattgcatgaagtttatgagaaagactccca
agataaaatccgttctaagtcggattttcctcatgtctaagtaactaagg
acaatacagactagactggctctagtctgcgaagttcattagtgccagag
aaggatctgatgtctatttctaccagagtaatcttcaagcctgggaaagt
gtttgaaaataacaaagtcttcggttaagggtattggcacagagaattag
aacacaaccatttcaacaaggtcatgaagttgatccagtatggcggatgg
gttagtgcgaggtagcacctgtgataggaaaggagcaggggtcgctctcc
aggcattgcctcccgctccgcctgtgcttcagcgctccctctggcccagg
ctgccttcagggttcctaaccgggctttctaatgccgaaagccggtgttc
cgagatctacctctccgggaaccccagctccggcacacttttctcttagg
gggttcctgaagtcccaaggttgggactcataattttccatgtattgacg
ctcaccttgccccagtctgttctaaatctcagacttttatttgcccgtcg
gtttgtccatccggctttggagctgaagttggaggagggcagctaacatc
cggttgcacggaggcacggatactgggctcaggagagctgaagcgccgct
ggcccacccggacctggcgatccttttcgggtcccctgcggtggtcgtgc
agtcacgtggcccgaggacgcgtggcggagtggggtgagcctctgaaggg
gcgcgcgggctgcgcagcggaaggttcgatccttgggacggatgcgcaga
gtgccagcgtcaggccaggacaccgggaacccgcggtggggatggtatga
agccgagctgcccaggagtgaaaacttgcagtggtggtcagactaccaat
a
tggccagcctgggcaacatagtaagaccctgtgacttcctcaaaagaaag
ggaaataggactggaaatacagcccaggaatcgactggctgcctagcact
agtgtgtgcacacattggagaggagtggggtgtggatagtttagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_101438974_101439973
seq2: B6Ng01-330F05.b_50_1050

seq1  GAATTCACACAGCCACTCCTGGAAGTAGTGCACTAGTTTCAACACAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGCCACTCCTGGAAGTAGTGCACTAGTTTCAACACAGGTA  50

seq1  TAGAATCACGTAGCTAGGTGATTGCATGAAGTTTATGAGAAAGACTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCACGTAGCTAGGTGATTGCATGAAGTTTATGAGAAAGACTCCCA  100

seq1  AGATAAAATCCGTTCTAAGTCGGATTTTCCTCATGTCTAAGTAACTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAATCCGTTCTAAGTCGGATTTTCCTCATGTCTAAGTAACTAAGG  150

seq1  ACAATACAGACTAGACTGGCTCTAGTCTGCGAAGTTCATTAGTGCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAGACTAGACTGGCTCTAGTCTGCGAAGTTCATTAGTGCCAGAG  200

seq1  AAGGATCTGATGTCTATTTCTACCAGAGTAATCTTCAAGCCTGGGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCTGATGTCTATTTCTACCAGAGTAATCTTCAAGCCTGGGAAAGT  250

seq1  GTTTGAAAATAACAAAGTCTTCGGTTAAGGGTATTGGCACAGAGAATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAATAACAAAGTCTTCGGTTAAGGGTATTGGCACAGAGAATTAG  300

seq1  AACACAACCATTTCAACAAGGTCATGAAGTTGATCCAGTATGGCGGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACCATTTCAACAAGGTCATGAAGTTGATCCAGTATGGCGGATGG  350

seq1  GTTAGTGCGAGGTAGCACCTGTGATAGGAAAGGAGCAGGGGTCGCTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGCGAGGTAGCACCTGTGATAGGAAAGGAGCAGGGGTCGCTCTCC  400

seq1  AGGCATTGCCTCCCGCTCCGCCTGTGCTTCAGCGCTCCCTCTGGCCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGCCTCCCGCTCCGCCTGTGCTTCAGCGCTCCCTCTGGCCCAGG  450

seq1  CTGCCTTCAGGGTTCCTAACCGGGCTTTCTAATGCCGAAAGCCGGTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCAGGGTTCCTAACCGGGCTTTCTAATGCCGAAAGCCGGTGTTC  500

seq1  CGAGATCTACCTCTCCGGGAACCCCAGCTCCGGCACACTTTTCTCTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATCTACCTCTCCGGGAACCCCAGCTCCGGCACACTTTTCTCTTAGG  550

seq1  GGGTTCCTGAAGTCCCAAGGTTGGGACTCATAATTTTCCATGTATTGACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCTGAAGTCCCAAGGTTGGGACTCATAATTTTCCATGTATTGACG  600

seq1  CTCACCTTGCCCCAGTCTGTTCTAAATCTCAGACTTTTATTTGCCCGTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTGCCCCAGTCTGTTCTAAATCTCAGACTTTTATTTGCCCGTCG  650

seq1  GTTTGTCCATCCGGCTTTGGAGCTGAAGTTGGAGGAGGGCAGCTAACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCCATCCGGCTTTGGAGCTGAAGTTGGAGGAGGGCAGCTAACATC  700

seq1  CGGTTGCACGGAGGCACGGATACTGGGCTCAGGAGAGCTGAAGCGCCGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGCACGGAGGCACGGATACTGGGCTCAGGAGAGCTGAAGCGCCGCT  750

seq1  GGCCCACCCGGACCTGGCGATCC-TTTCGGGTCCCCTGCGGTGGTCGTGC  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGCCCACCCGGACCTGGCGATCCTTTTCGGGTCCCCTGCGGTGGTCGTGC  800

seq1  AGTCACGTGGCCCGAGGACGCGTGGCGGAGTGGGGTGAGCCTCTGAAGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACGTGGCCCGAGGACGCGTGGCGGAGTGGGGTGAGCCTCTGAAGGG  850

seq1  GCGCGCGGGCTGCGCAGCGGAAGGTTCGATCCTTGGGACGGATGCGCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCGGGCTGCGCAGCGGAAGGTTCGATCCTTGGGACGGATGCGCAGA  900

seq1  GTGCCAGCGTCAGGCCAGGACACCGGGAACCCGCGGTGGGGAGGGTATGG  949
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  GTGCCAGCGTCAGGCCAGGACACCGGGAACCCGCGGTGGGGATGGTATGA  950

seq1  AGCCGAGCTGCCCAGGAGTGGAAAC-TGCAGGTGGTGGTCAGACTAGCAA  998
      |||||||||||||||||||| |||| |||| ||||||||||||||| |||
seq2  AGCCGAGCTGCCCAGGAGTGAAAACTTGCA-GTGGTGGTCAGACTACCAA  999

seq1  TA  1000
      ||
seq2  TA  1001

seq1: chr13_101607217_101607364
seq2: B6Ng01-330F05.g_72_219 (reverse)

seq1  TCCCCTAAACTATCCACACCCCACTCCTCTCCAATGTGTGCACACACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTAAACTATCCACACCCCACTCCTCTCCAATGTGTGCACACACTAG  50

seq1  TGCTAGGCAGCCAGTCGATTCCTGGGCTGTATTTCCAGTCCTATTTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCAGCCAGTCGATTCCTGGGCTGTATTTCCAGTCCTATTTCCCT  100

seq1  TTCTTTTGAGGAAGTCACAGGGTCTTACTATGTTGCCCAGGCTGGCCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGAGGAAGTCACAGGGTCTTACTATGTTGCCCAGGCTGGCCA  148