BAC Information

Click to search

BAC

Clone NameB6Ng01-332O16
Chromosome13 (Build37)
Map Location 42,649,834 - 42,650,417
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621976, EG328231, 9530008L14Rik, LOC100039272, Hivep1, Edn1, Hn1-ps4
Downstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332O16.b
ACCGA118882
length659
definitionB6Ng01-332O16.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatgcgtgagttatctcattcccctaccttaattaatgccggt
agatgtccctgcccacccagttggtggttgggaggggtggaaactcgcgc
cttttgcgttacattgcctttccaaggtgatgaagtttcttcctgcaatt
cttgatggtaacctataccaaattgatgttcaattctagatttttatcct
cgcttccatcacaataagctgtttccctctttctcctctaacaaaatatc
agggtctgattcaccaataactccctatcttataaacccttcccccctga
ggctaaaagaaagaactggactagctcatacacttatgaaactctttaat
gtctctgaaagtgatttcaggttttgttttgtttttttttttttctgaaa
gtgatcaatccctcatacccctagggatagaagagatccacagtgcaagg
tctttccagagaaagctgaacattcattattttaaaagatgcaatccagc
tagggattgaaatttgcctaaagtggagacataaaaaggattcaaactat
aaacaggggagccaatttctagcctttttatgttcagaggcaaaaactga
agaatccatctctctctctctctctctctctctctctctctctctctctg
tctctcttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_42649834_42650417
seq2: B6Ng01-332O16.b_120_700 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT  50

seq1  GGATTCTTCAGTTTTTGCCTCTGAACATAAAAAGGCTAGAAATTGGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTTCAGTTTTTGCCTCTGAACATAAAAAGGCTAGAAATTGGCTCC  100

seq1  CCTGTTTATAGTTTGAATCCTTTTTATGTCTCCACTTTAGGCAAATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTATAGTTTGAATCCTTTTTATGTCTCCACTTTAGGCAAATTTCA  150

seq1  ATCCCTAGCTGGATTGCATCTTTTAAAATAATGAATGTTCAGCTTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAGCTGGATTGCATCTTTTAAAATAATGAATGTTCAGCTTTCTCT  200

seq1  GGAAAGACCTTGCACTGTGGATCTCTTCTATCCCTAGGGGTATGAGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACCTTGCACTGTGGATCTCTTCTATCCCTAGGGGTATGAGGGAT  250

seq1  TGATCACTTTCAGAAAAAAAAAAAAACAAAACAAAACCTGAAATCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTTTCAGAAAAAAAAAAAAACAAAACAAAACCTGAAATCACTTT  300

seq1  CAGAGACATTAAAGAGTTTCATAAGTGTATGAGCTAGTCCAGTTCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACATTAAAGAGTTTCATAAGTGTATGAGCTAGTCCAGTTCTTTCT  350

seq1  ATTAGCCCCAGGGGGGAAGGGTTTATAAGGTAGGGTATGATTGGTGAAAT  400
       |||||| ||||||||||||||||||||| |||||  | |||||||||  
seq2  TTTAGCCTCAGGGGGGAAGGGTTTATAAGATAGGGAGTTATTGGTGAATC  400

seq1  TTGCCTTGATATTTTGTT--TGCTGAATTTGGATTTGGTACAGCTTATTC  448
         || ||||||||||||   |  |||   ||    |  |||||||||| 
seq2  AGACCCTGATATTTTGTTAGAGGAGAAAGAGG----GAAACAGCTTATTG  446

seq1  TCTTGAAAGGGAAGATCTGAACTTATTATTATTAATTTTTTTGGTATAGG  498
      |  || ||| || |||   ||  ||  |||    ||   |||||||||||
seq2  TGATGGAAGCGAGGATAAAAATCTAGAATTGAACATCAATTTGGTATAGG  496

seq1  TTACCATTGTCTTATTCCAGGTAAAAAGTCTATCACCCTATTTTAGCAAT  548
      |||||| |     ||| |||| | ||| |  |||||| |      |||||
seq2  TTACCA-TCAAGAATTGCAGGAAGAAACTTCATCACCTTGGAAAGGCAAT  545

seq1  GCTGCAATAATTGTGGGAGTTTCCACCCCTCCCAAC  584
      |   |   ||  | | ||||||||||||||||||||
seq2  GTAACGCAAAAGGCGCGAGTTTCCACCCCTCCCAAC  581