BAC Information

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BAC

Clone NameB6Ng01-337M08
Chromosome13 (Build37)
Map Location 82,972,810 - 82,973,861
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238756
Downstream geneLOC667018, Mef2c, LOC100043111, LOC623241, LOC432789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337M08.bB6Ng01-337M08.g
ACCGA122290GA122291
length9231,045
definitionB6Ng01-337M08.b B6Ng01-337M08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggttatttgtttt
tctggagtctaacttcttgagttctttgtatatgttggatattagccctc
tatcggatatagggttgataaagatctttttccaatatgttggttgccat
tttgtcttaatgacagtgttctttgccttccagaaggttttcaattttat
aaggtcccatttgtcataaagtctaattaacatgaccgcccaaatgtgag
ctgaacagggatgacaggagggaacatgccaaattgaacagagaaaatat
ttgtgaggtctcaaccctatacaaacaactacaagtaactggagaatgct
cacacggggagaacgagtcttctctagggaagagaaaagcctcgccaaat
ggtcagctctgaaatcatacattcaagtaacaatctatgagctgagcaga
cataggacatgtttagaagtacacatgtatatgcatatacacatacacaa
gcacatactcacatgaatacatatatgcatgcaatagcaattaataaaag
caagaggtcatgaatagagccgggatgaatgtataagaggatgtgttagg
aggaaagagaagagagcaatgttgtaataatattgcaatcttaaaaaaaa
aataaaagagtttttaaaaaggagttaagcgcacatgaactaaagcacca
accaaagagtacacatgggggtatccatgagtccagccacataaatagca
gaggatggccttatctggtgtcaatgggacgggagccccttagtcctgtg
aaggctcaatgagccagtgttggggaacgctagggcgttgaggcagtact
gggtggctgagtgggggagcatcctcatagagatgggtgcaggggaaagg
gtaggaggtttgtggaagaaaaa

gaattcacttggcaaatgacagcctttgcactccttttaggtctttgacc
ttactgcccttgctaatattttagaatgtctagaaagaatacaccggagc
tattcatgaactagcaatttggctagaaaatgtagcctgaaaatgaaaat
ggaaactcagtgcaaagacagactatgactacaaagctgagcagccaact
ttctatagagaacataaaaggaaaaaaggttataagtcacaccccattca
tgtattaaacaaccacaattctttctatccataaggcataaaacattcca
tctactttaatataaaagttatttgataagcaaaaagttagctttggaaa
tgaaagaaaataactaagtagcatgacttaattaataagaaggaagcaac
agcaagactctgaagaatcaatgctccctttcgggtaatatatttattga
gagttttctacaatgacttttgacttcatgattttatgaaatgtctggaa
gtagagatttaattggatcaataaaatcaggtaaatacatatatcaatgt
tatatgattcagacccaaaaggacacacatggtatgcactcactgataag
tggacattagcccaaaagctcaaaatacccataatacaactcacagacca
tctgaagcttaacaagaaagacaccaaagtgtggttgcttcaatctcatt
taggagggggaacaaaataatcatggagggtagagggaagaagggtcctg
ggtagaaaaggagagagggagagaaaatgggggtaagattcaggtatggg
aagaaacaggtaagaagttcagaggacaggaagaataaatagaaatattg
agcagtaagagttggggagcaggggggaccattaaaatgtcccagatgcc
agggatgcgagaggctcccaggaccagtggggatgaccttagctgaaatg
taaatggcagattgaacatgagagatcacttccagtagatagaaaagccg
cagtgatgaaggtcactcacacatctcaaaaatttaggttccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_82972810_82973861
seq2: B6Ng01-337M08.g_65_1109

seq1  GAATTCACTTGGCAAATGACAGCCTTTGCACTCCTTTTAGGTCTTTGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGCAAATGACAGCCTTTGCACTCCTTTTAGGTCTTTGACC  50

seq1  TTACTGCCCTTGCTAATATTTTAGAATGTCTAGAAAGAATACACCGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCCCTTGCTAATATTTTAGAATGTCTAGAAAGAATACACCGGAGC  100

seq1  TATTCATGAACTAGCAATTTGGCTAGAAAATGTAGCCTGAAAATGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATGAACTAGCAATTTGGCTAGAAAATGTAGCCTGAAAATGAAAAT  150

seq1  GGAAACTCAGTGCAAAGACAGACTATGACTACAAAGCTGAGCAGCCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCAGTGCAAAGACAGACTATGACTACAAAGCTGAGCAGCCAACT  200

seq1  TTCTATAGAGAACATAAAAGGAAAAAAGGTTATAAGTCACACCCCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGAGAACATAAAAGGAAAAAAGGTTATAAGTCACACCCCATTCA  250

seq1  TGTATTAAACAACCACAATTCTTTCTATCCATAAGGCATAAAACATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAAACAACCACAATTCTTTCTATCCATAAGGCATAAAACATTCCA  300

seq1  TCTACTTTAATATAAAAGTTATTTGATAAGCAAAAAGTTAGCTTTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTTAATATAAAAGTTATTTGATAAGCAAAAAGTTAGCTTTGGAAA  350

seq1  TGAAAGAAAATAACTAAGTAGCATGACTTAATTAATAAGAAGGAAGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAAATAACTAAGTAGCATGACTTAATTAATAAGAAGGAAGCAAC  400

seq1  AGCAAGACTCTGAAGAATCAATGCTCCCTTTCGGGTAATATATTTATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGACTCTGAAGAATCAATGCTCCCTTTCGGGTAATATATTTATTGA  450

seq1  GAGTTTTCTACAATGACTTTTGACTTCATGATTTTATGAAATGTCTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCTACAATGACTTTTGACTTCATGATTTTATGAAATGTCTGGAA  500

seq1  GTAGAGATTTAATTGGATCAATAAAATCAGGTAAATACATATATCAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATTTAATTGGATCAATAAAATCAGGTAAATACATATATCAATGT  550

seq1  TATATGATTCAGACCCAAAAGGACACACATGGTATGCACTCACTGATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTCAGACCCAAAAGGACACACATGGTATGCACTCACTGATAAG  600

seq1  TGGACATTAGCCCAAAAGCTCAAAATACCCATAATACAACTCACAGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTAGCCCAAAAGCTCAAAATACCCATAATACAACTCACAGACCA  650

seq1  TCTGAAGCTTAACAAGAAAGACACCAAAGTGTGGTTGCTTCAATCTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCTTAACAAGAAAGACACCAAAGTGTGGTTGCTTCAATCTCATT  700

seq1  TAGGAGGGGGAACAAAATAATCATGGAGGGTAGAGGGAAGAAGGGTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGGGGAACAAAATAATCATGGAGGGTAGAGGGAAGAAGGGTCCTG  750

seq1  GGTAGAAAAGGAGAGAGGGAGAGAAAATGGGGGTAAGATTCAGGTATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAAAGGAGAGAGGGAGAGAAAATGGGGGTAAGATTCAGGTATGGG  800

seq1  AAGAAACAGGTAAGAAGTTCAGAGGACAGGAAGAATAAATAGAAATATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGGTAAGAAGTTCAGAGGACAGGAAGAATAAATAGAAATATTG  850

seq1  AGCAGTAAGAGTTGGGGAGCAGGGGGGACCATTAAAATGTCCCAGATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAAGAGTTGGGGAGCAGGGGGGACCATTAAAATGTCCCAGATGCC  900

seq1  AGGGATGCGAGAGGCTCCCAGGACCCAGTGGGGATGACCTTAGCTGAAAT  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGGATGCGAGAGGCTCCCAGGA-CCAGTGGGGATGACCTTAGCTGAAAT  949

seq1  GGAAATGGAAGATTGAACATGAAGAGATCACTTCCAGTAGATAGAAAAGG  1000
      | |||||| |||||||||||| |||||||||||||||||||||||||| |
seq2  GTAAATGGCAGATTGAACATG-AGAGATCACTTCCAGTAGATAGAAAA-G  997

seq1  CCGCCAGTTGAGGGAAGGGTCCACTCACACATCTCAAAAATTTTAG-TCC  1049
      ||| ||| |||  |||||   ||||||||||||||||||||||  | |||
seq2  CCG-CAG-TGA-TGAAGG--TCACTCACACATCTCAAAAATTTAGGTTCC  1042

seq1  AGA  1052
      |||
seq2  AGA  1045


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