BAC Information

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BAC

Clone NameB6Ng01-338H06
Chromosome13 (Build37)
Map Location 80,188,586 - 80,189,161
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925
Downstream geneLOC382780, EG666933, Arrdc3, LOC666964, LOC100043074, LOC218368
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338H06.bB6Ng01-338H06.g
ACCGA122753GA122754
length1,0301,109
definitionB6Ng01-338H06.b B6Ng01-338H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcggcttcatattaccaatcacaatagtgtttaatgtagatgct
atttgtagtatagaacaaaaattatttacacagctccagacagccggcca
ccttcctggtgagagcatgggggtctgccccgcctgagaggtttgtgtca
caggcgccagcgggagccttcttggctccgggactccgcggagggcaggc
tgcactggagaccgtgtggaatacagaggccagccgtttctgggacgggc
gagagtcgcagagcttctggggcggcgccatcttcggctccagacaacca
gccaccttcctggcgagagccacagagcttctgaggtggcgacatcttca
actccagacaaccggccactttcctgaccaaagcaactcagcttctggga
aagatcctgttttgggccttcaccttcagccaggaggaggtccaaacacc
agataactgtacaccttccccgaaagaggagagcttgcctgcagagactg
ctctgaccacttaaactcagaggagagagcttgtctcccacgcctgctga
ttgagggtaacaaaatcaacagaggaacaatctcttaacaaagacaacta
taacaactaactccagagattgccagatggcgaaaggtaaacgtaagaat
cctactaacagaaaccaggaccactcaccatcatcagaacccagaacgcc
cacttcgcccagtccaagacaccctaacacacctgaaaaggtagacctgg
atttaaaagcatatctcatgatgatggtagaggacataaagaaggaattc
aataactcacttaaagagatacaggagaacactgctaaagagttacaagt
ccttaaagaaaaacaggaaaacactgctaaagagttacaagtccttaaag
aaaaacaggaaaacacaaccaaacaggtagaagtccttatagaaaaacag
gaaaacacatccaaacagtgatggaaatgaacaaaaccatactagaccta
aaagggagtagacacataaagaaaacccaa

gaattcattgatattaagagatttttaagggaaaataattgttttttgct
gttatttttgttgttagaggtaggattatgtttatgtgcttatcttcttt
tgggtttgttaaaagaagattattttctcgattttttttttctagggtgt
agtttcctccttgtgttggagctttctatttattatcctttaaatgggtg
gatttctggaaagatattgtgtaaatttgttattgtcatggaatgtcttg
gtttccccatctatgataattgagagttttgttggttatagtagcctggg
ctggcatttgtattctcttagtgtctatatgatgctgtccaggattatct
gagttttatagtcactgtcaagaagtctggtataattctgataggtctga
ctttatatgataatttgatctttttcccttactgcttttaatattctttc
tccgttttgtgcacttggtgttttgattatcatgtgacaggaggaattta
ttttgttgtctaatctatttggtgttctgtaggcttcttatatgttcatg
ggcatctttttcttaagttagggagtttttttttcccaataattttgttg
aagatatttactggccctttaattgggaatcttcactctcttctattatc
cttaggtttggatttcctggatgttttgtgttaggatctttttgcatttt
gcattttctttgattattgtgtcaatgttttctatggtatcttctgcacc
tgagattctcatttctatttcttgtattcttttttgatgcttgtatctat
gactcctgatctctttcctaggtttttccatcttcaggttatctcccttt
gtgattttcttttattgtttgtacttccatttttagattctggatggctg
tgtacatttccttcacctgttttgttctgttttcctttaattctttaagg
gacttttgtgttttcttcttctaaggcttctaccttatttatctgtgttc
tcctatatttctttaaaggggtatttatgtccttttttaaatctctatcc
tgaattgcatttcatatgtaattgaaaaattctataagagaaaatcctta
gaccaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80188586_80189161
seq2: B6Ng01-338H06.b_49_624

seq1  GAATTCTCGGCTTCATATTACCAATCACAATAGTGTTTAATGTAGATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGCTTCATATTACCAATCACAATAGTGTTTAATGTAGATGCT  50

seq1  ATTTGTAGTATAGAACAAAAATTATTTACACAGCTCCAGACAGCCGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGTATAGAACAAAAATTATTTACACAGCTCCAGACAGCCGGCCA  100

seq1  CCTTCCTGGTGAGAGCATGGGGGTCTGCCCCGCCTGAGAGGTTTGTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGGTGAGAGCATGGGGGTCTGCCCCGCCTGAGAGGTTTGTGTCA  150

seq1  CAGGCGCCAGCGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGCCAGCGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGC  200

seq1  TGCACTGGAGACCGTGTGGAATACAGAGGCCAGCCGTTTCTGGGACGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGAGACCGTGTGGAATACAGAGGCCAGCCGTTTCTGGGACGGGC  250

seq1  GAGAGTCGCAGAGCTTCTGGGGCGGCGCCATCTTCGGCTCCAGACAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCGCAGAGCTTCTGGGGCGGCGCCATCTTCGGCTCCAGACAACCA  300

seq1  GCCACCTTCCTGGCGAGAGCCACAGAGCTTCTGAGGTGGCGACATCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTCCTGGCGAGAGCCACAGAGCTTCTGAGGTGGCGACATCTTCA  350

seq1  ACTCCAGACAACCGGCCACTTTCCTGACCAAAGCAACTCAGCTTCTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGACAACCGGCCACTTTCCTGACCAAAGCAACTCAGCTTCTGGGA  400

seq1  AAGATCCTGTTTTGGGCCTTCACCTTCAGCCAGGAGGAGGTCCAAACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCTGTTTTGGGCCTTCACCTTCAGCCAGGAGGAGGTCCAAACACC  450

seq1  AGATAACTGTACACCTTCCCCGAAAGAGGAGAGCTTGCCTGCAGAGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTGTACACCTTCCCCGAAAGAGGAGAGCTTGCCTGCAGAGACTG  500

seq1  CTCTGACCACTTAAACTCAGAGGAGAGAGCTTGTCTCCCACGCCTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACCACTTAAACTCAGAGGAGAGAGCTTGTCTCCCACGCCTGCTGA  550

seq1  TTGAGGGTAACAAAATCAACAGAGGA  576
      ||||||||||||||||||||||||||
seq2  TTGAGGGTAACAAAATCAACAGAGGA  576


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