BAC Information

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BAC

Clone NameB6Ng01-340B16
Chromosome13 (Build37)
Map Location 70,470,769 - 70,471,923
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik
Downstream geneEG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340B16.bB6Ng01-340B16.g
ACCGA123909GA123910
length1,1491,112
definitionB6Ng01-340B16.b B6Ng01-340B16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttgcacgtcttcattcttggaccaggtgcctacatcgcccc
aggccatagctctgaatacccacattcaagctcctccccactgttgaccc
ctcatagtacaccccctgcactacccactcctacactacctacccctgca
ttctcacccctacactgccgacctgacactgcccatcccctgcactgtct
actcaatgtctttcctcatatgcatcagagatttggggtgggggatgttc
cataggactctttggtaccaacaaagccatggctagctgactggtcatgg
aggctgggcagggtgttggcatgtccatcactgtagtccaaatgtcaaga
cagtctggatcactatgcttaggaaataagtggctggcaggatgtgtcct
gagtattggagatgaattctgtctcctgggttctcatgttgaatcagtaa
ccccacctccttcagaaccaatggtcgttgatggagtgtattgttaacag
agaggacgtgagccttaacatggctgctgtctctacacagagacaaccga
gcagacacgcagagtgaagactgcaagggctgtagggatcagctactgtt
ttcactcaggaagagaaccccctttaccttgcactcccagccttcagaac
tctgtgaggattcactgatggcccgtcagcccggccaggctgtgatgctc
ggttatgatcactccagaaagccaggacagtgagccattgtcctgcttgt
gtatgaggaactggttactagctgatgggatttgggaagagactggcttg
agagatgactggtttatcaatgttataacccactgatgagtccatagctg
agtgtgtcctaggaggtgggcggggtgaaggacgtggcccatagtggacg
tattcttgaagggccagttttctttttaactagcaacttttatgtacccc
atctttctccttcctggatactatgaagtggacaacttccctttctgcca
tgacactctgtgtcctcttagggccagaaatgtaagatcatggccatggg
tgggaatcttctaaagccatgacctagaatcatcttctccccgttctcag
tgttgccttcctgacctagtcttaccattagaaggacagttacatggcc

gaattctattcatcttttctacctgtcctgagctttggagcctgtatgca
caatgtaacttctaatcaatccccaatatcttggccagtccctgatttac
ctgggcaacaaaggcaggtccattacctcgggaagatttcttctaggatc
ttcttggctatcacattggccatctcagtcctgcttggaaaagcttctac
ccaccttgaaaaggtgtcttcaaccactaggctactgccatccttgtacc
agctcgaactctcaggccaaggctgatctgatccttcagatcatttcgag
taccagtttcttctggcagaatgtcagtgcagtgatgagtagggcagtag
ggtatcaagattgaggacagcaggtggagtgaaggtcacttgttcagtca
acaaaaaagctctgataatgtgtcacaggagcgttggtcatcatccatca
gtcagggggctttcggataatgctttcaagactgtggggtgccactacag
ttatttgctgtcccaaagtgagcttatcagcatccttgataagcagagct
atggcagcaatagcttacaggcaagaaaaccacccgctggcaacagggtc
taacttcttggataggtaagccactggcctttttcaaggtcccaaagtct
gagtaaggactcttctggcaacccctactctttcatcaggcaaggctaag
gctggggccgttagtagggccttttaaaaggctttctggtaatctggggt
ccacacaaacacctctccttccttggttgggggtacaatgggcagctaaa
gttgccaacccaggtgtctagagcctgcagaagccagcagtacccaagag
ttctcttacttgccttagtgtagttggggtggggatctgagttacagtct
tttttctggctttctttagccagtactttcccgtctcgaaggtgtatccc
aatagtacttcagtctgacacagctgagctttttagctgaagctctgtcc
tctgtgccagatttcctgtctagatctgtcatttcgtctcgcatcactgc
agcagatctagtcaatttctccctgtctatgatccctcttgccatccgtt
tttttctggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70470769_70471923
seq2: B6Ng01-340B16.b_46_1194

seq1  GAATTCTCCTTGCACGTCTTCATTCTTGGACCAGGTGCCTACATCGCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTGCACGTCTTCATTCTTGGACCAGGTGCCTACATCGCCCC  50

seq1  AGGCCATAGCTCTGAATACCCACATTCAAGCTCCTCCCCACTGTTGACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATAGCTCTGAATACCCACATTCAAGCTCCTCCCCACTGTTGACCC  100

seq1  CTCATAGTACACCCCCTGCACTACCCACTCCTACACTACCTACCCCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTACACCCCCTGCACTACCCACTCCTACACTACCTACCCCTGCA  150

seq1  TTCTCACCCCTACACTGCCGACCTGACACTGCCCATCCCCTGCACTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCCCTACACTGCCGACCTGACACTGCCCATCCCCTGCACTGTCT  200

seq1  ACTCAATGTCTTTCCTCATATGCATCAGAGATTTGGGGTGGGGGATGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGTCTTTCCTCATATGCATCAGAGATTTGGGGTGGGGGATGTTC  250

seq1  CATAGGACTCTTTGGTACCAACAAAGCCATGGCTAGCTGACTGGTCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGACTCTTTGGTACCAACAAAGCCATGGCTAGCTGACTGGTCATGG  300

seq1  AGGCTGGGCAGGGTGTTGGCATGTCCATCACTGTAGTCCAAATGTCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGCAGGGTGTTGGCATGTCCATCACTGTAGTCCAAATGTCAAGA  350

seq1  CAGTCTGGATCACTATGCTTAGGAAATAAGTGGCTGGCAGGATGTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGGATCACTATGCTTAGGAAATAAGTGGCTGGCAGGATGTGTCCT  400

seq1  GAGTATTGGAGATGAATTCTGTCTCCTGGGTTCTCATGTTGAATCAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTGGAGATGAATTCTGTCTCCTGGGTTCTCATGTTGAATCAGTAA  450

seq1  CCCCACCTCCTTCAGAACCAATGGTCGTTGATGGAGTGTATTGTTAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTCCTTCAGAACCAATGGTCGTTGATGGAGTGTATTGTTAACAG  500

seq1  AGAGGACGTGAGCCTTAACATGGCTGCTGTCTCTACACAGAGACAACCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACGTGAGCCTTAACATGGCTGCTGTCTCTACACAGAGACAACCGA  550

seq1  GCAGACACGCAGAGTGAAGACTGCAAGGGCTGTAGGGATCAGCTACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACGCAGAGTGAAGACTGCAAGGGCTGTAGGGATCAGCTACTGTT  600

seq1  TTCACTCAGGAAGAGAACCCCCTTTACCTTGCACTCCCAGCCTTCAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAGGAAGAGAACCCCCTTTACCTTGCACTCCCAGCCTTCAGAAC  650

seq1  TCTGTGAGGATTCACTGATGGCCCGTCAGCCCGGCCAGGCTGTGATGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGGATTCACTGATGGCCCGTCAGCCCGGCCAGGCTGTGATGCTC  700

seq1  GGTTATGATCACTCCAGAAAGCCAGGACAGTGAGCCATTGTCCTGCTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGATCACTCCAGAAAGCCAGGACAGTGAGCCATTGTCCTGCTTGT  750

seq1  GTATGAGGAACTGGTTACTAGCTGATGGGATTTGGGAAGAGACTGGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAACTGGTTACTAGCTGATGGGATTTGGGAAGAGACTGGCTTG  800

seq1  AGAGATGACTGGTTTATCAATGTTATAACCCACTGATGAGTCCATAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGACTGGTTTATCAATGTTATAACCCACTGATGAGTCCATAGCTG  850

seq1  AGTGTGTCCTAGGAGGTGGGCGGGGTGAAGGACGTGGCCCATAGTGGACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTCCTAGGAGGTGGGCGGGGTGAAGGACGTGGCCCATAGTGGACG  900

seq1  TATTC-TGAAGGG-CAGTTTTCTTTTTAACTAGCAACTTTTATGTACCCC  948
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGAAGGGCCAGTTTTCTTTTTAACTAGCAACTTTTATGTACCCC  950

seq1  ATCTTTCTCCTTCCTGGATACTATGAAGTGGACAAC-TCCCTTTCTGCCA  997
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATCTTTCTCCTTCCTGGATACTATGAAGTGGACAACTTCCCTTTCTGCCA  1000

seq1  TGACACTCTGTGTCCTCTTAGGGGCCAGAAATGTAAGGATCAATGGCCAT  1047
      |||||||||||||||||||| ||||||||||||||| |||| ||||||||
seq2  TGACACTCTGTGTCCTCTTA-GGGCCAGAAATGTAA-GATC-ATGGCCAT  1047

seq1  GGGTGGAAATC-TCTAAAGCCATGAACTAGAATCAATCTCTCCCCGTTTC  1096
      |||||| |||| ||||||||||||| |||||||||   ||||||||||  
seq2  GGGTGGGAATCTTCTAAAGCCATGACCTAGAATCATCTTCTCCCCGTT--  1095

seq1  CTCAGGTGTTGCTTTCTTGGAACTTAGTCATACCATTAGAAAGACCAGTT  1146
      |||| ||||||| ||| ||  || ||||| ||||||||||| || |||||
seq2  CTCA-GTGTTGCCTTCCTG--ACCTAGTCTTACCATTAGAAGGA-CAGTT  1141

seq1  ACCATGGCC  1155
      | |||||||
seq2  A-CATGGCC  1149


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