BAC Information

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BAC

Clone NameB6Ng01-340N15
Chromosome13 (Build37)
Map Location 85,548,429 - 85,549,176
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1
Downstream geneLOC435373, LOC675662, Cox7c, LOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340N15.bB6Ng01-340N15.g
ACCGA124419GA124420
length1,048694
definitionB6Ng01-340N15.b B6Ng01-340N15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctctggtgggctagaaagcaaagatattagagaggaaccagg
gccaaggtatatctttataggctaggttcctagtgatgtacttcctcaag
ctaggccagacttctacaattgctttccagtaacatactaacattaaaaa
tccacaaatggtcatagccctcatgatttactacctcagtgactggactg
attagttgggagacaaagccattagcacatgagcctttttggagattttt
cacacccagatcacaatattctgttcatgtcccctgaaggcttatggtct
gctcacaatgccaagtgcatttagtctgactcttagtgctcctaaagatt
aaataaccctgacattattcaaaagttgaatttcagtctccttagtctct
ttagtctcatattcacttcttagttgtaaaatcaaaaataaggttacctg
tatctgatatatgatggggctgggtagacattttcattttttttaaaaca
tttttaattagatattttctttatttacatttcaaatgttatcccctttc
ctagtttcccctcagaaaatccctcattccctccccctccccccaaccta
cccactcccattcccagtcctggcattcccctattcttgggcatagaacc
ttcacaggacctagggcctctcctcccattgataactgactaggccatcc
tctgctacatatactgctagaaccacatgttccaccatatgttttctttg
attcgtggtttacttccaaggagctcttaggggtactggctagttcatat
tgatattcctcctaatgggctgcaaacctcttcagctccttgcatatttt
ctctggctctttcattggggacctgtgctccgtccaatggataattgtga
gcatccacttctgtatttgtcaggcataagcagaggccctcaggacacag
ctatatcagctcctgtcagcagctcttgttggcatctgccatagtgtctg
ggtttggtggtgtttatggcatggatcccaagtggagcagtcttctgg

gaattccagtggactgaagacatcaaccttcccacaaatccttgaaccta
agatttgtcttgcctacaagatgcacaggaataaagatggagcagagatt
gaggaaacagccagtgaatgactgccctgatttgagaccaatctcctgac
actagtaatcaaactctaccatgcttgtggacaaacctagcataactgtc
tcctaagaggctttatctagaagctgatggaaaaagatgcaaagacccac
aacaaaacatcagtcatacctcagggactcttgtggaagagtggagaacg
aattgagcaagcaagagaggtcaaggaaaccacaggaagacctctgaaat
caactaacctgggtccatgggggctcacagaaactgaatcaccaaccaaa
gagcatgcccgacctggaccttggctccctatacatttgtagcagatgtg
caacttggtcttcatatcagttccctaacaactggagtccggactgtctg
gaactctgttgcctgccactggatcctctacatggattgcctgcttagac
ctcactgggacaggatatgcctagtcctgctaggactagatttctcagga
tatggtggtatacaaggggagattccccttctcctcagagaagaggaagg
gtgatgagagaattggcaagattgggaggagaggagggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_85548429_85549176
seq2: B6Ng01-340N15.b_45_792

seq1  GAATTCACCTCTGGTGGGCTAGAAAGCAAAGATATTAGAGAGGAACCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCTGGTGGGCTAGAAAGCAAAGATATTAGAGAGGAACCAGG  50

seq1  GCCAAGGTATATCTTTATAGGCTAGGTTCCTAGTGATGTACTTCCTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGTATATCTTTATAGGCTAGGTTCCTAGTGATGTACTTCCTCAAG  100

seq1  CTAGGCCAGACTTCTACAATTGCTTTCCAGTAACATACTAACATTAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCAGACTTCTACAATTGCTTTCCAGTAACATACTAACATTAAAAA  150

seq1  TCCACAAATGGTCATAGCCCTCATGATTTACTACCTCAGTGACTGGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAATGGTCATAGCCCTCATGATTTACTACCTCAGTGACTGGACTG  200

seq1  ATTAGTTGGGAGACAAAGCCATTAGCACATGAGCCTTTTTGGAGATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTGGGAGACAAAGCCATTAGCACATGAGCCTTTTTGGAGATTTTT  250

seq1  CACACCCAGATCACAATATTCTGTTCATGTCCCCTGAAGGCTTATGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCAGATCACAATATTCTGTTCATGTCCCCTGAAGGCTTATGGTCT  300

seq1  GCTCACAATGCCAAGTGCATTTAGTCTGACTCTTAGTGCTCCTAAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAATGCCAAGTGCATTTAGTCTGACTCTTAGTGCTCCTAAAGATT  350

seq1  AAATAACCCTGACATTATTCAAAAGTTGAATTTCAGTCTCCTTAGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCCTGACATTATTCAAAAGTTGAATTTCAGTCTCCTTAGTCTCT  400

seq1  TTAGTCTCATATTCACTTCTTAGTTGTAAAATCAAAAATAAGGTTACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCATATTCACTTCTTAGTTGTAAAATCAAAAATAAGGTTACCTG  450

seq1  TATCTGATATATGATGGGGCTGGGTAGACATTTTCATTTTTTTTAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATATATGATGGGGCTGGGTAGACATTTTCATTTTTTTTAAAACA  500

seq1  TTTTTAATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTC  550

seq1  CTAGTTTCCCCTCAGAAAATCCCTCATTCCCTCCCCCTCCCCCCAACCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCCCCTCAGAAAATCCCTCATTCCCTCCCCCTCCCCCCAACCTA  600

seq1  CCCACTCCCATTCCCAGTCCTGGCATTCCCCTATTCTTGGGCATAGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCATTCCCAGTCCTGGCATTCCCCTATTCTTGGGCATAGAACC  650

seq1  TTCACAGGACCTAGGGCCTCTCCTCCCATTGATAACTGACTAGGCCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGACCTAGGGCCTCTCCTCCCATTGATAACTGACTAGGCCATCC  700

seq1  TCTGCTACATATACTGCTAGAACCACATGTTCCACCATATGTTTTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACATATACTGCTAGAACCACATGTTCCACCATATGTTTTCTT  748


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