MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-343B05
Chromosome	13 (Build37)
Map Location	57,227,209 - 57,341,006
singlet/doublet	doublet
Overlap gene	LOC100040995
Upstream gene	H2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2, Tgfbi, Smad5, EG627415, Trpc7
Downstream gene	Spock1, Klhl3, Hnrpa0, 5133401N09Rik, Ubqln1, LOC671252, Gkap1
Link	Open Mouse BAC browser

Click to get alignment info.

name	H2afy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26914 MGI:1349392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC027057 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212937 MGI:2385852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18014 MGI:107754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57266 MGI:1888514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	AU042651 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328258 MGI:2145373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lect2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16841 MGI:1278342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfbi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21810 MGI:99959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17129 MGI:1328787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627415 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trpc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spock1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20745 MGI:105371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klhl3 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 19 Proteins

name	Hnrpa0 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77134 MGI:1924384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 244 ESTs, 50 Proteins

name	5133401N09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ubqln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56085 MGI:1860276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC671252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins pseudo : _no_value

name	Gkap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56278 MGI:1891694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	H2afy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41152516 GeneID:26914 MGI:1349392
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H2A histone family, member Y transcript_id : NM_012015.1

name	BC027057 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381297 GeneID:212937 MGI:2385852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC027057 transcript_id : NM_145976.3

name	Neurog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271508 GeneID:18014 MGI:107754
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenin 1 transcript_id : NM_010896.2

name	Cxcl14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392097 GeneID:57266 MGI:1888514
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 14 transcript_id : NM_019568.2

name	LOC100040926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264244 GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040926 transcript_id : XM_001475501.1

name	AU042651 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384287 GeneID:328258 MGI:2145373
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU042651 transcript_id : NM_177809.3

name	Il9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680436 GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 9 transcript_id : NM_008373.1

name	Fbxl21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803463 GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 21 transcript_id : NM_178674.4

name	Lect2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754529 GeneID:16841 MGI:1278342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukocyte cell-derived chemotaxin 2 transcript_id : NM_010702.1

name	Tgfbi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803530 GeneID:21810 MGI:99959
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta induced transcript_id : NM_009369.2

name	Smad5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734445 GeneID:17129 MGI:1328787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 5 (Drosophila) transcript_id : NM_008541.2

name	EG627415 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395150 GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG627415 transcript_id : XM_892071.2

name	Trpc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129964 GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 7 transcript_id : NM_012035.2

name	Spock1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50053937 GeneID:20745 MGI:105371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 transcript_id : NM_009262.2

name	Klhl3 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264250 GeneID:627648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 19 Proteins product : kelch-like 3 (Drosophila) transcript_id : XM_354754.6

name	Hnrpa0 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395153 GeneID:77134 MGI:1924384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 244 ESTs, 50 Proteins product : heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 transcript_id : XM_891442.2

name	5133401N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205441 GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5133401N09 gene transcript_id : NM_198004.2

name	5133401N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205445 GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5133401N09 gene transcript_id : NM_001048060.1

name	Ubqln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22726198 GeneID:56085 MGI:1860276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquilin 1 transcript_id : NM_026842.3

name	Ubqln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22726190 GeneID:56085 MGI:1860276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquilin 1 transcript_id : NM_152234.1

name	Gkap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383921 GeneID:56278 MGI:1891694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G kinase anchoring protein 1 transcript_id : NM_019832.3

name	H2afy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41152517 CCDS:CCDS26557.1 GeneID:26914 MGI:1349392
definition	GO_component : GO:0001740 - Barr body [Evidence ISS]; GO:0005813 - centrosome [Evidence TAS]; GO:0000793 - condensed chromosome [Evidence IDA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007549 - dosage compensation [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 note : MACROH2A1.2 product : H2A histone family, member Y protein_id : NP_036145.1

name	BC027057 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122419 CCDS:CCDS26558.1 GeneID:212937 MGI:2385852
definition	codon_start : 1 product : hypothetical protein LOC212937 protein_id : NP_666088.1

name	Neurog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754826 CCDS:CCDS26559.1 GeneID:18014 MGI:107754
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0031536 - positive regulation of exit from mitosis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : neurogenic differentiation 3 product : neurogenin 1 protein_id : NP_035026.1

name	Cxcl14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392098 GeneID:57266 MGI:1888514
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : musculus CXC chemokine MIP-2gamma; small inducible cytokine subfamily B (Cys-X-Cys), member 14 product : kidney-expressed chemokine CXC protein_id : NP_062514.2

name	LOC100040926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264245 GeneID:100040926
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475551.1

name	AU042651 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244360 CCDS:CCDS26561.1 GeneID:328258 MGI:2145373
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC328258 protein_id : NP_808477.1

name	Il9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680437 CCDS:CCDS26562.1 GeneID:16198 MGI:96563
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA]; GO:0005140 - interleukin-9 receptor binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0045407 - positive regulation of interleukin-5 biosynthesis [Evidence IMP] codon_start : 1 product : interleukin 9 protein_id : NP_032399.1

name	Fbxl21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776547 CCDS:CCDS26563.1 GeneID:213311 MGI:2442921
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 21 protein_id : NP_848789.2

name	Lect2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754530 CCDS:CCDS26564.1 GeneID:16841 MGI:1278342
definition	GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chondromodulin-II product : leukocyte cell-derived chemotaxin 2 protein_id : NP_034832.1

name	Tgfbi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678321 GeneID:21810 MGI:99959
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 function : cell adhesion inhibitor note : transforming growth factor, beta induced, 68 kDa product : transforming growth factor, beta induced protein_id : NP_033395.1

name	Smad5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678774 CCDS:CCDS26565.1 GeneID:17129 MGI:1328787
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030509 - BMP signaling pathway [Evidence TAS] [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] [Evidence IDA] codon_start : 1 note : Smad 5 product : MAD homolog 5 protein_id : NP_032567.1

name	EG627415 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950827 GeneID:627415 MGI:3648142
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897164.1

name	Trpc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755889 CCDS:CCDS26566.1 GeneID:26946 MGI:1349470
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transient receptor protein 8; mouse transient receptor potential protein homologue TRP7 product : transient receptor potential cation channel, subfamily C, member 7 protein_id : NP_036165.1

name	Spock1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50053938 GeneID:20745 MGI:105371
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : sparc/osteonectin, cwcv and kazal-like domains proteoglycan product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 protein_id : NP_033288.2

name	Klhl3 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264251 GeneID:627648
definition	codon_start : 1 product : similar to Kelch-like protein 3 protein_id : XP_354754.6

name	Hnrpa0 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950644 GeneID:77134 MGI:1924384
definition	codon_start : 1 product : heterogeneous nuclear ribonucleoprotein A0 isoform 2 protein_id : XP_896535.1

name	5133401N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205442 GeneID:75731 MGI:1922981
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : gluconokinase-like protein isoform a protein_id : NP_932121.2

name	5133401N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205446 GeneID:75731 MGI:1922981
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : gluconokinase-like protein isoform b protein_id : NP_001041525.1

name	Ubqln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22726191 CCDS:CCDS26569.1 GeneID:56085 MGI:1860276
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0019215 - intermediate filament binding [Evidence NAS]; GO:0019900 - kinase binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence NAS] GO_process : GO:0008632 - apoptotic program [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0031396 - regulation of protein ubiquitination [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ubiquilin 1 isoform 2 protein_id : NP_689420.1

name	Ubqln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22726199 GeneID:56085 MGI:1860276
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0019215 - intermediate filament binding [Evidence NAS]; GO:0019900 - kinase binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence NAS] GO_process : GO:0008632 - apoptotic program [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0031396 - regulation of protein ubiquitination [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ubiquilin 1 isoform 1 protein_id : NP_081118.3

name	Gkap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789999 GeneID:56278 MGI:1891694
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007199 - G-protein signaling, coupled to cGMP nucleotide second messenger [Evidence TAS] codon_start : 1 note : 42 kD cGMP-dependent protein kinase anchoring protein product : G kinase anchoring protein 1 protein_id : NP_062806.1

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 2 pseudo : _no_value

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 1 pseudo : _no_value

name	LOC671252 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264262 GeneID:671252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins product : similar to Ac2-210 pseudo : _no_value transcript_id : XR_032911.1

clone name	MSMg01-359F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356G22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-343B05.b	B6Ng01-343B05.g
ACC	GA125952	GA125953
length	1,179	1,101
definition	B6Ng01-343B05.b	B6Ng01-343B05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(57,339,824 - 57,341,006)	(57,227,209 - 57,228,315)
sequence	gaattctattctttaaataccagggagattggttggtgtcttagttaagg ttttactgctgtgaacagacaccatgaccaaagcaactcttataaaggac aacacttaattggggttggcttacaggttcagaggttcagtccattatca aggtgggagcatggctgtatcgaggcaggcatggtacaggaggagctgag tgttctacatcttcatccgaaagctgctagcagaatactggcttccagac agctaggatgagggcttaaagctggcacctacagtgacacacctactcca agagggccacaccttttaatagtgccattccctgggctgagcatatacaa accatcacagctagtttctaggaaaaggcagacttcctagcttcatcctt gaagatgacacactcaaagtgagcgaactttctgggcagcagcacagaga aagcacccagaaatacaaggtctgagatggtccctaacaatccaaccttc catacagtttcttatgaagtttctgcatcatttgcctcagccgcatgctt ggctggctcctggtgctgcttccaggggcactggaagatgccactataca tcttttcactttatgccaaatagaacaccaggtggggcagtaaagagtct ttcatactcactaacatgtcaacttgttttgaaacatgaaggcttcttta tttcaacccgtatgaaggtgaaaattcttctaatacatcccagctgcctt tccagcaaacactgtcttcttgatgttgtttgcctggacaattatttcca aatggagaaggacatcataattttcaatagcatgaaactcagtcttaggg actggaatcaatcatgagaaactgaggtattttcttccccagcaggtttt aagttacagaatttgactgtacaaacttccgttagtgacaatagtcagaa ggggcctggcagtcacctagaggacgctgggaaatgaacacatctttatc accagtgtttaggagaaaggcccagaaaacatctctgtgggttttcagaa atacttgtagactttatgctcatgtcaaataggaactataacctctacaa tcatgatgcctcctaggtcggatttcatgattatacatataatttaagtc ataaattatcaatagctgttattgaatat	gaattcactatccctgatgctgtatgatgaaatagggcagtgattttcat tataaagtcaaataatgtggggtgagatacagtgacctaaaatggcagta atatggaggcttgggctggaaaactaggggtttgaagctagcctgggcta cctagggtgaccctgtctcaaaacaacaccaccaacaagcagcaataaca aaagccacagaacaaaccaaaaagatatgagtgtaggaaaagattttggg gtggtggggctggggctggaggctgggagtaagtagggtgcattttatac atgtatggaaacatcaaagaacaaatttaattaactttaaaagcgacttt tacaaagtcactcaacgagggcccttgagcctgaatttctgggcaacatc tgtctgttttgcctcactgatggggatggttcttctttaaacagagttct agatgtttcagtagctagaagaaacttggtgttcccacccctatgactcc agataatggccagtatttactgttgtcagcctggaatctgagagccttgg ccctgaagattcagctgtgccctggaactcgtaatgaccagggcccacag ggtttatcagttttatttcttttattctctcagattcaccttttctccac ctggagggtttctattgctgggttgaagcaccatgaccaaaaagcaagtt ggagagggaagggtttatttggcttagacttccgagtcactgtttatcat cgaaggaactcagacaggaactcaaacagggcgagagctgatacagaggc cacggcggagtactttttgcttattgaagtacaatttgctcagcctgctt tctcgaagaacccagaaccactgcccagggtggccccacccacaataggc tggggcccttcctcatcaatcactaattataaaaacgcccttacagctgg atcttatggagacatattctcatttaagagcttccttttcagacatcttc tagcttgtgtcagatgacatagactagcatccccaccccttttctgcctt gactattctggtaacctgcttttttaggttctttgggggtgggggttggg a
quality values	Open. Hide. 58 31 27 34 62 62 62 50 54 62 62 62 62 47 56 62 62 62 62 62 44 37 62 62 44 38 59 43 36 41 38 22 28 32 38 28 43 62 62 62 62 62 62 62 62 59 54 54 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 59 62 62 59 62 59 62 56 62 59 46 54 42 32 54 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 54 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 47 52 54 58 58 58 58 54 54 58 58 58 58 58 40 45 39 58 48 58 50 58 58 58 58 58 54 49 58 58 58 58 58 49 47 47 58 58 58 43 51 51 58 58 45 46 58 58 50 49 54 58 46 51 51 46 45 49 51 58 53 58 58 58 58 51 54 50 50 50 58 54 53 58 54 51 58 51 58 51 54 40 51 52 58 58 58 50 44 41 37 44 49 50 51 54 50 38 41 50 58 58 51 58 42 58 58 58 44 51 58 50 43 52 54 58 54 52 42 46 50 42 41 50 41 58 41 38 39 58 58 49 32 44 49 58 50 50 50 53 39 51 49 37 20 51 27 52 53 54 54 35 37 53 45 39 54 51 34 39 51 42 41 50 37 51 44 49 39 37 42 52 49 52 34 44 39 49 49 37 45 25 42 53 35 54 53 42 45 53 37 51 38 53 51 51 45 40 31 45 42 31 51 36 47 46 23 54 26 39 25 53 38 52 46 28 31 27 33 37 53 45 34 49 47 32 27 16 51 40 32 34 40 30 31 53 53 19 53 33 30 31 40 43 40 45 31 47 34 53 51 33 43 31 33 39 42 33 31 31 35 43 30 46 40 27 33 31 31 28 31 31 34 43 30 8 47 40 26 22 31 45 38 30 27 32 39 33 27 31 33 29 31 31 37 23 42 47 34 28 31 32 42 18 31 29 31 30 46 46 33 32 31 30 27 46 36 31 33 22 31 17 21 25 26 46 46 37 29 34 30 31 36 26 31 27 29 30 27 31 46 30 26 37 31 31 37 24 29 25 22 46 33 17 24 38 18 34 31 31 32 34 33 32 31 31 27 18 21 29 32 24 26 31 34 29 24 5 10 23 41 22 21 26 32 27 30 22 20 21 31 34 24 17 22 24 21 6 19 19 16 34 18 26 29 34 32 48 25 12 47 26 27 31 28 22 23 14 32 24 34 32 29 48 23 25 19 15 11 8 31 16 21 16 25 24 43 16 21 17 11 34 14 29 39 25 7 25 21 40 32 21 14 22 47 36 7 9 14 33 31 32 24 24 27 12 18 29 18 11 34 34 26 20 18 21 20 47 8 4 7 14 11 10 16 8 14 14 27 13 24 28 9 14 19 8 16 3 9 24 20 20 16 6 13 28 12 9 10 13 7 15 9 10 6 7 14 20 26 13 7 7 14 25 13 24 10 14 12 18 16 6 11 23 22 13 9 8 6 5 11 7 14 9 5 5 17 6 1 2 4 23 20 7 6 5 11 11 7 8 5 4 3 3 4 4 5 2 7 17 10 25 15 6 11 8 5 8 18 9 20 28 13 5 5 7 7 8 3 4 5 18 4 8 4 7 5 4 14 5 13 5 3 2 5 4 5	Open. Hide. 62 59 46 46 62 59 39 59 59 51 56 34 48 48 34 35 54 59 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 49 49 62 62 62 59 59 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 35 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 62 62 62 62 62 62 49 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 58 58 58 58 46 36 43 42 58 58 58 58 51 58 52 58 58 58 58 58 58 54 58 58 58 54 58 58 50 54 35 58 54 54 52 58 58 58 54 58 58 58 58 58 58 39 49 58 49 58 54 58 43 58 54 45 58 47 41 54 52 54 54 58 52 58 58 48 49 51 51 58 58 49 58 58 49 54 54 58 48 51 58 58 44 47 42 58 58 54 48 58 58 51 50 38 58 51 52 50 58 50 50 40 51 39 58 46 39 41 58 58 58 58 58 51 50 42 49 37 41 58 58 58 58 37 22 49 49 26 58 50 51 49 52 51 48 49 37 54 58 58 58 41 54 51 46 51 29 50 37 37 58 27 49 42 49 40 49 26 58 58 58 58 35 50 40 58 52 58 50 58 51 53 33 49 40 54 39 31 38 25 54 45 37 54 51 24 20 54 46 50 54 32 54 35 28 13 44 32 44 49 25 33 23 28 16 27 41 30 18 41 41 49 54 53 39 40 42 34 42 38 29 54 22 9 52 33 35 29 44 37 6 10 21 19 37 24 54 49 29 30 53 33 37 52 40 47 31 29 52 36 28 31 31 26 31 21 31 35 27 34 30 31 47 32 32 35 24 36 30 32 20 32 31 51 32 32 28 28 9 28 39 33 42 51 51 51 45 31 26 31 45 21 11 9 15 29 33 21 31 24 30 14 33 27 47 30 31 31 31 31 30 13 30 31 31 42 30 34 48 15 15 20 25 23 31 31 8 46 32 13 37 31 28 12 34 30 19 24 18 37 31 30 26 25 19 25 31 46 31 16 39 31 6 46 41 38 26 19 23 18 9 17 31 26 24 33 32 37 18 24 32 32 32 6 11 46 31 11 20 41 13 5 22 25 32 31 14 27 23 25 24 27 33 19 34 13 6 43 18 23 43 44 32 29 28 18 15 36 18 28 25 21 9 9 24 31 31 26 22 16 20 24 24 25 33 32 26 16 31 11 30 18 16 22 17 23 26 21 26 22 29 5 33 23 9 30 12 12 8 21 24 26 7 5 7 30 39 26 10 18 10 21 9 7 12 8 6 13 22 12 21 18 18 11 5 7 11 10 17 13 24 6 3 16 7 11 8 6 11 11 4 27 17 28 13 4 3 3 9 16 40 40 17 19 3 22 8 10 3 30 28 6 7 6 3 7 21 9 13 11 10 8 8 10 18 19 28 28 7 7 22 10 11 14 21 20 27 16 12 27 15 7 16 24 16 20 24 9 4 3 10 7 9 11 10 26 27 18 5 4 3 12 16 8 3 4 5 3 1 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_57339824_57341006
seq2: B6Ng01-343B05.b_46_1224 (reverse)

seq1  ATATTCAATATACAGCTATTGGATAAATTTATGACTTAAATTATTAATGT  50
      |||||||||| ||||||||| ||| |||||||||||||||||||  ||| 
seq2  ATATTCAATA-ACAGCTATT-GAT-AATTTATGACTTAAATTAT--ATG-  44

seq1  TATAATCATGAAATACGA-CTA-GAGCAATCATGATTGGTAGA-GTTATA  97
      |||||||||||||| ||| ||| |||  ||||||||| ||||| ||||||
seq2  TATAATCATGAAATCCGACCTAGGAGGCATCATGATT-GTAGAGGTTATA  93

seq1  GTTCCTATTTGACATGAGGCATAAAGTCTACAAGTATTTCTGAAAACCCA  147
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTCCTATTTGACATGA-GCATAAAGTCTACAAGTATTTCTGAAAACCCA  142

seq1  CAGAGATG-TTTCTGGGCCTTTCTCCTAAACACTGGTGATAAAGATGTGT  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGTTTTCTGGGCCTTTCTCCTAAACACTGGTGATAAAGATGTGT  192

seq1  TCATTTCCCAGCGTCCTCTAGGTGACTGCCAGGCCCCTTCTGACTATTGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCCAGCGTCCTCTAGGTGACTGCCAGGCCCCTTCTGACTATTGT  242

seq1  CACTAACGGAAGTTTGTACAGTCAAATTCTGTAACTTAAAACCTGCTGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACGGAAGTTTGTACAGTCAAATTCTGTAACTTAAAACCTGCTGGG  292

seq1  GAAGAAAATACCTCAGTTTCTCATGATTGATTCCAGTCCCTAAGACTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATACCTCAGTTTCTCATGATTGATTCCAGTCCCTAAGACTGAG  342

seq1  TTTCATGCTATTGAAAATTATGATGTCCTTCTCCATTTGGAAATAATTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTATTGAAAATTATGATGTCCTTCTCCATTTGGAAATAATTGT  392

seq1  CCAGGCAAACAACATCAAGAAGACAGTGTTTGCTGGAAAGGCAGCTGGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAACAACATCAAGAAGACAGTGTTTGCTGGAAAGGCAGCTGGGA  442

seq1  TGTATTAGAAGAATTTTCACCTTCATACGGGTTGAAATAAAGAAGCCTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGAAGAATTTTCACCTTCATACGGGTTGAAATAAAGAAGCCTTC  492

seq1  ATGTTTCAAAACAAGTTGACATGTTAGTGAGTATGAAAGACTCTTTACTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAAAACAAGTTGACATGTTAGTGAGTATGAAAGACTCTTTACTG  542

seq1  CCCCACCTGGTGTTCTATTTGGCATAAAGTGAAAAGATGTATAGTGGCAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTGGTGTTCTATTTGGCATAAAGTGAAAAGATGTATAGTGGCAT  592

seq1  CTTCCAGTGCCCCTGGAAGCAGCACCAGGAGCCAGCCAAGCATGCGGCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTGCCCCTGGAAGCAGCACCAGGAGCCAGCCAAGCATGCGGCTG  642

seq1  AGGCAAATGATGCAGAAACTTCATAAGAAACTGTATGGAAGGTTGGATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATGATGCAGAAACTTCATAAGAAACTGTATGGAAGGTTGGATTG  692

seq1  TTAGGGACCATCTCAGACCTTGTATTTCTGGGTGCTTTCTCTGTGCTGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGACCATCTCAGACCTTGTATTTCTGGGTGCTTTCTCTGTGCTGCT  742

seq1  GCCCAGAAAGTTCGCTCACTTTGAGTGTGTCATCTTCAAGGATGAAGCTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAAGTTCGCTCACTTTGAGTGTGTCATCTTCAAGGATGAAGCTA  792

seq1  GGAAGTCTGCCTTTTCCTAGAAACTAGCTGTGATGGTTTGTATATGCTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTGCCTTTTCCTAGAAACTAGCTGTGATGGTTTGTATATGCTCA  842

seq1  GCCCAGGGAATGGCACTATTAAAAGGTGTGGCCCTCTTGGAGTAGGTGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGAATGGCACTATTAAAAGGTGTGGCCCTCTTGGAGTAGGTGTG  892

seq1  TCACTGTAGGTGCCAGCTTTAAGCCCTCATCCTAGCTGTCTGGAAGCCAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTAGGTGCCAGCTTTAAGCCCTCATCCTAGCTGTCTGGAAGCCAG  942

seq1  TATTCTGCTAGCAGCTTTCGGATGAAGATGTAGAACACTCAGCTCCTCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGCTAGCAGCTTTCGGATGAAGATGTAGAACACTCAGCTCCTCCT  992

seq1  GTACCATGCCTGCCTCGATACAGCCATGCTCCCACCTTGATAATGGACTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATGCCTGCCTCGATACAGCCATGCTCCCACCTTGATAATGGACTG  1042

seq1  AACCTCTGAACCTGTAAGCCAACCCCAATTAAGTGTTGTCCTTTATAAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGAACCTGTAAGCCAACCCCAATTAAGTGTTGTCCTTTATAAGA  1092

seq1  GTTGCTTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCTTAACTAAGAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCTTAACTAAGAC  1142

seq1  ACCAACCAATCTCCCTGGTATTTAAAGAATAGAATTC  1183
      |||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAATCTCCCTGGTATTTAAAGAATAGAATTC  1179

seq1: chr13_57227209_57228315
seq2: B6Ng01-343B05.g_63_1163

seq1  GAATTCACTATCCCTGATGCTGTATGATGAAATAGGGCAGTGATTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATCCCTGATGCTGTATGATGAAATAGGGCAGTGATTTTCAT  50

seq1  TATAAAGTCAAATAATGTGGGGTGAGATACAGTGACCTAAAATGGCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTCAAATAATGTGGGGTGAGATACAGTGACCTAAAATGGCAGTA  100

seq1  ATATGGAGGCTTGGGCTGGAAAACTAGGGGTTTGAAGCTAGCCTGGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGGCTTGGGCTGGAAAACTAGGGGTTTGAAGCTAGCCTGGGCTA  150

seq1  CCTAGGGTGACCCTGTCTCAAAACAACACCACCAACAAGCAGCAATAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGTGACCCTGTCTCAAAACAACACCACCAACAAGCAGCAATAACA  200

seq1  AAAGCCACAGAACAAACCAAAAAGATATGAGTGTAGGAAAAGATTTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCACAGAACAAACCAAAAAGATATGAGTGTAGGAAAAGATTTTGGG  250

seq1  GTGGTGGGGCTGGGGCTGGAGGCTGGGAGTAAGTAGGGTGCATTTTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGGCTGGGGCTGGAGGCTGGGAGTAAGTAGGGTGCATTTTATAC  300

seq1  ATGTATGGAAACATCAAAGAACAAATTTAATTAACTTTAAAAGCGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGGAAACATCAAAGAACAAATTTAATTAACTTTAAAAGCGACTTT  350

seq1  TACAAAGTCACTCAACGAGGGCCCTTGAGCCTGAATTTCTGGGCAACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTCACTCAACGAGGGCCCTTGAGCCTGAATTTCTGGGCAACATC  400

seq1  TGTCTGTTTTGCCTCACTGATGGGGATGGTTCTTCTTTAAACAGAGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTTGCCTCACTGATGGGGATGGTTCTTCTTTAAACAGAGTTCT  450

seq1  AGATGTTTCAGTAGCTAGAAGAAACTTGGTGTTCCCACCCCTATGACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTCAGTAGCTAGAAGAAACTTGGTGTTCCCACCCCTATGACTCC  500

seq1  AGATAATGGCCAGTATTTACTGTTGTCAGCCTGGAATCTGAGAGCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGGCCAGTATTTACTGTTGTCAGCCTGGAATCTGAGAGCCTTGG  550

seq1  CCCTGAAGATTCAGCTGTGCCCTGGAACTCGTAATGACCAGGGCCCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGATTCAGCTGTGCCCTGGAACTCGTAATGACCAGGGCCCACAG  600

seq1  GGTTTATCAGTTTTATTTCTTTTATTCTCTCAGATTCACCTTTTCTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATCAGTTTTATTTCTTTTATTCTCTCAGATTCACCTTTTCTCCAC  650

seq1  CTGGAGGGTTTCTATTGCTGGGTTGAAGCACCATGACCAAAAAGCAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTTTCTATTGCTGGGTTGAAGCACCATGACCAAAAAGCAAGTT  700

seq1  GGAGAGGGAAGGGTTTATTTGGCTTAGACTTCCGAGTCACTGTTTATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGAAGGGTTTATTTGGCTTAGACTTCCGAGTCACTGTTTATCAT  750

seq1  CGAAGGAACTCAGGACAGGAACTCAAACAGGGCGAGAGCTGATACAGAGG  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGAAGGAACTCA-GACAGGAACTCAAACAGGGCGAGAGCTGATACAGAGG  799

seq1  CCACGGCGGAGTACTTTTTGCTTATTGAAGTACAATTTGCTCAGCCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGCGGAGTACTTTTTGCTTATTGAAGTACAATTTGCTCAGCCTGCT  849

seq1  TTCTCGAAGAACCCAGAACCACTGCCCAGGGTGGCCCCACCCACAATAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAAGAACCCAGAACCACTGCCCAGGGTGGCCCCACCCACAATAGG  899

seq1  CTGGG--CCCTCCCCATCAATCACTAATAATAAAAACG-CCTTACAGCTG  947
      |||||  || ||| |||||||||||||| ||||||||| |||||||||||
seq2  CTGGGGCCCTTCCTCATCAATCACTAATTATAAAAACGCCCTTACAGCTG  949

seq1  GATCTTATGGAGACATATTCTCAATTAAGAGCTTCCTTTTTCAGACATC-  996
      ||||||||||||||||||||||| |||||||||||| |||||||||||| 
seq2  GATCTTATGGAGACATATTCTCATTTAAGAGCTTCC-TTTTCAGACATCT  998

seq1  TCTAGCTTGTGTCAAGTTGACATAAGACTAGCCATCCCCCAACCCCCTTT  1046
      ||||||||||||| || |||||| ||||||| |||||||  ||||| |||
seq2  TCTAGCTTGTGTC-AGATGACAT-AGACTAG-CATCCCC--ACCCCTTTT  1043

seq1  CTGCCCTGACTATTCTTGTTAACCTGCTTTTTTAGGGTTACTTTGGGGGT  1096
      ||||| ||||||||| || |||||||||||||||||  | ||||||||||
seq2  CTGCCTTGACTATTC-TGGTAACCTGCTTTTTTAGG--TTCTTTGGGGGT  1090

seq1  GGGGGTGGGGA  1107
      |||||| ||||
seq2  GGGGGTTGGGA  1101

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information