BAC Information

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BAC

Clone NameB6Ng01-344K14
Chromosome13 (Build37)
Map Location 50,250,622 - 50,251,226
singlet/doubletsinglet
Overlap genenone
Upstream geneNinj1, 1110007C09Rik, Susd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085
Downstream geneLOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344K14.bB6Ng01-344K14.g
ACCGA127089GA127090
length1,200605
definitionB6Ng01-344K14.b B6Ng01-344K14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcacctgtcttggagtagccagtgttggtatttgagtcacag
tcctttttctagcctctgccagccaccgtttgccatctcagagggtatat
cccaagtagactacttccatctgacatagctgggctttttttagcagagg
cccggtaacccaactcacccagttctgctagcaatctcttggtcctctgc
cagcattctctctctgtggttacagcaaggagcaagtcatcaacatattg
aagcagagttatctgggagttttcagctcagaaggaggctaaatctcgat
gtagagcctcatcaaaaagggtgggggagtttttgaacccctggggtaat
agcatccaggccaattgttctgtttgtctagtgtcaggatctctccactc
aaaggcaaatatgggctcgctggagggatgtaacttcaggcaaaagaaag
catcttttaaatcaagtacagtgtactattttcgctccggagggagtgag
ctgaggaggttatagggactaggaacagttgggtgaatatcttggaccct
cttattgacctctctcaggtcttgtactggttgatagagcctcgtgccag
gtttctttaccggcagtagagtagtattccagggtgactggcaaggtacc
aaaatacctaattgtaatagtctctgattatgtggcctgattccatctct
tacttcacggctcattgggtattgttgcactcctataggggttgcatccg
ttttcagtcccgcaaccacagggggaactctgacagccattcccatgcca
ccagtctctgcccatgctctagggaaagcagacaaccaatcttttaggtc
tggcatctccgtttgctttatgccttcatgcaatttgtattcttcctcaa
gctgcaaggctaagactacggaggtgggagatttccaacttactctcggc
ccttcttgggtaaatctatctgggctttcatttagtcagaaatctcttct
agaagcagtgtgggacactcagaatgactcactgcctttacccagatcta
cgtgtgcaacagtgtcaggtattgttctgaccagtgctcatcattaggtc
ctttatttgatttccttgaatgttcacaagaatgttctgcctgatcatat
gtccatgagtcttcaccatcaggaataccaatgtccattgagggcatgat

gaattcatatttctctcaacaattaactaaagaggagtagaggaagaacc
aggttcctagtaatccccacttctcaacatagacacattggacacctatt
ctctgctatgaacgaaggcaggctgacactgtgatggtctggagatccta
cactcagagccccaggctatgagtcaggcctgttagagactctttcctca
gagtccacagaccaggaaatgcctgggaaggaattttatctatgtatctt
tctgggtacctaaaaaccagggcaaggcttttgaaaacagactttgatta
ccttgtgtgatcccaggtttatatgtagatataagaaactcctgaggaca
tagtgacaggtcctgctgcactggctagtgcatacacattaagtctactg
tgtacccaggcctgagggtcagacagaaagttatgccagcctgaagggag
ttccagatgcctcccacataggaacaaaatgtttattgctcctgactgag
aagtgccattgcatcttggaatcttgaattatgcagtgtgcgtgtgtgca
tgtgcctgtggtttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50250622_50251226
seq2: B6Ng01-344K14.g_67_671

seq1  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAGAGGAAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAGAGGAAGAACC  50

seq1  AGGTTCCTAGTAATCCCCACTTCTCAACATAGACACATTGGACACCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCTAGTAATCCCCACTTCTCAACATAGACACATTGGACACCTATT  100

seq1  CTCTGCTATGAACGAAGGCAGGCTGACACTGTGATGGTCTGGAGATCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTATGAACGAAGGCAGGCTGACACTGTGATGGTCTGGAGATCCTA  150

seq1  CACTCAGAGCCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAGCCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCA  200

seq1  GAGTCCACAGACCAGGAAATGCCTGGGAAGGAATTTTATCTATGTATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCACAGACCAGGAAATGCCTGGGAAGGAATTTTATCTATGTATCTT  250

seq1  TCTGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTA  300

seq1  CCTTGTGTGATCCCAGGTTTATATGTAGATATAAGAAACTCCTGAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTGATCCCAGGTTTATATGTAGATATAAGAAACTCCTGAGGACA  350

seq1  TAGTGACAGGTCCTGCTGCACTGGCTAGTGCATACACATTAAGTCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACAGGTCCTGCTGCACTGGCTAGTGCATACACATTAAGTCTACTG  400

seq1  TGTACCCAGGCCTGAGGGTCAGACAGAAAGTTATGCCAGCCTGAAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCAGGCCTGAGGGTCAGACAGAAAGTTATGCCAGCCTGAAGGGAG  450

seq1  TTCCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAG  500

seq1  AAGTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGCA  550

seq1  TGTGCCTGTGGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGTGGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGT  600

seq1  GTGTG  605
      |||||
seq2  GTGTG  605