BAC Information

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BAC

Clone NameB6Ng01-348G06
Chromosome13 (Build37)
Map Location 67,467,972 - 67,600,353
singlet/doubletdoublet
Overlap geneZfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik
Downstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348G06.bB6Ng01-348G06.g
ACCGA129697GA129698
length5521,077
definitionB6Ng01-348G06.b B6Ng01-348G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,599,796 - 67,600,353)(67,467,972 - 67,469,047)
sequence
tccttgtctgaagcagccacagtggtttacacccctcccttgcttttctg
cctcttgcatggcttctccttccttacactgcacatcaaagtgtgtagaa
tgcatctctagttagccaaaacagaaaccctgctcctgctcctcacgtgg
ggaatgagagccagatttacatgtggcatcaaccagtgtactggctagtt
ttgtgtcaacttgacacaggctggagttatcacagagaaaggagcttcag
ttggggaaatgcctccacaagatccagttataaggcattttctcaatgac
tgcaacttttaaagccccataagacagagtaatgaaaatctgtgtttctc
aagtttatctcatgcatacgtatttggtttctattcaattctgtccaaat
aacatctgtaatttttctcaatggcctctgacatcatcacttatacgacc
aagacctggacgccattatccagcatacttccccttccgagttagtgatc
aaggggggagggtcccttgtgggtggtgccatctctaggctggtagactt
gg
gaattctctgatgttgcttcagcattgaaagatagtaaaatgttctgcca
cagtcttcacacttgtagattttttcatcagtatgatttttcatgtatat
aaaaagtgatgagcgagtactgaaggccttatgacactcttcacacttgt
aaggtttgtctccagtgtgaagtctctgatgtatagaaagtgttttatga
gaactaagggccttaccacattctccacacttgtagggtttctcccctat
atgatttcttctttgtgtaataaggagtgatttacaattagtcagtttgc
tgaaattgttaggatcattgggttttattcctgttgagccaaagatgaga
tatgaacaaaagttaagcaatattctttttaattataaggcttatttttt
taaaatgaagacattaactcatatatattaaaccataaataaaaatccac
agtatatttcaatgcctgtgacactgaggaaaattcacaaatacagtagg
tggaaacaatgggtagttttactggaaaaagagtacaatcaaacagaaca
taaaaacaatcgcatattattcaaaggtaaatgcctaaataagttgtaaa
accattttactaacagaaatagtcctttcaagcaatatagatattacaag
gccacacatccatgaaattttaaagtagctaagcctaaaaaaagaaaaag
ttaattatgattgtgtgagattggatgaacacacttttatcctaagtaaa
aagatttattttggaaggtacaaaagatatgttgcataacaagtacactg
tccacatcaagattaaatcatatagcctcaggatttgggacagtatttta
tgatttatactgatgaatggaaaatatatacttgagagatatcaaggcag
aataataaatatcaagctcacccatgagtaacagaaattttgctggagca
acgtatgtgtcaatgaatagatatctcaattatctattagttatattgtt
ggggtggtctcagatttttgagacagggttttctttgtagaactgccctg
tctgcaaattggttacgtattgtgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67599796_67600353
seq2: B6Ng01-348G06.b_41_598 (reverse)

seq1  CCAAGACTACCAGCCTAGAGATGGCACCACCCACAAGGGACCCTCCCCCC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTACCAGCCTAGAGATGGCACCACCCACAAGGGACCCTCCCCCC  50

seq1  TTGATCACTAACTCGGAAGGGGAAGTATGCTGGATAATGGCGTCCAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACTAACTCGGAAGGGGAAGTATGCTGGATAATGGCGTCCAGGTC  100

seq1  TTGGTCGTCTAAGTGATGATGTCAGAGGCCATTGAGAAAAATTACAGATG  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCGTATAAGTGATGATGTCAGAGGCCATTGAGAAAAATTACAGATG  150

seq1  TTATTTGGACAGAATTGAATAGAAACCAAATACGTATGCATGAGATAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGACAGAATTGAATAGAAACCAAATACGTATGCATGAGATAAAC  200

seq1  TTGAGAAACACAGATTTTCATTACTCTGTCTTATGGGGCTTTAAAAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAACACAGATTTTCATTACTCTGTCTTATGGGGCTTTAAAAGTTG  250

seq1  CAGTCATTGAGAAAATGCCTTATAACTGGATCTTGTGGAGGCATTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTGAGAAAATGCCTTATAACTGGATCTTGTGGAGGCATTTCCCC  300

seq1  AACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTCAAGTTGACAC  350

seq1  AAAACTAGCCAGTACACTGGTTGATGCCACATGTAAATCTGGCTCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAGCCAGTACACTGGTTGATGCCACATGTAAATCTGGCTCTCATT  400

seq1  CCCCACGTGAGGAGCAGGAGCAGGGTTTCTGTTTTGGCTAACTAGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACGTGAGGAGCAGGAGCAGGGTTTCTGTTTTGGCTAACTAGAGATG  450

seq1  CATTCTACACACTTTGATGTGCAGTGTAAGGAAGGAGAAGCCATGCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTACACACTTTGATGTGCAGTGTAAGGAAGGAGAAGCCATGCAAGA  500

seq1  GGCAGAAAAGCAAGGGAGGGGTGTAAACCACTGTGGCTGCTTCAGACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAAGCAAGGGAGGGGTGTAAACCACTGTGGCTGCTTCAGACAAG  550

seq1  GAGAATTC  558
      ||||||||
seq2  GAGAATTC  558

seq1: chr13_67467972_67469047
seq2: B6Ng01-348G06.g_68_1144

seq1  GAATTCTCTGATGTTGCTTCAGCATTGAAAGATAGTAAAATGTTCTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGTTGCTTCAGCATTGAAAGATAGTAAAATGTTCTGCCA  50

seq1  CAGTCTTCACACTTGTAGATTTTTTCATCAGTATGATTTTTCATGTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCACACTTGTAGATTTTTTCATCAGTATGATTTTTCATGTATAT  100

seq1  AAAAAGTGATGAGCGAGTACTGAAGGCCTTATGACACTCTTCACACTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGATGAGCGAGTACTGAAGGCCTTATGACACTCTTCACACTTGT  150

seq1  AAGGTTTGTCTCCAGTGTGAAGTCTCTGATGTATAGAAAGTGTTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGTCTCCAGTGTGAAGTCTCTGATGTATAGAAAGTGTTTTATGA  200

seq1  GAACTAAGGGCCTTACCACATTCTCCACACTTGTAGGGTTTCTCCCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGGGCCTTACCACATTCTCCACACTTGTAGGGTTTCTCCCCTAT  250

seq1  ATGATTTCTTCTTTGTGTAATAAGGAGTGATTTACAATTAGTCAGTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTTCTTTGTGTAATAAGGAGTGATTTACAATTAGTCAGTTTGC  300

seq1  TGAAATTGTTAGGATCATTGGGTTTTATTCCTGTTGAGCCAAAGATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTTAGGATCATTGGGTTTTATTCCTGTTGAGCCAAAGATGAGA  350

seq1  TATGAACAAAAGTTAAGCAATATTCTTTTTAATTATAAGGCTTATTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACAAAAGTTAAGCAATATTCTTTTTAATTATAAGGCTTATTTTTT  400

seq1  TAAAATGAAGACATTAACTCATATATATTAAACCATAAATAAAAATCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAAGACATTAACTCATATATATTAAACCATAAATAAAAATCCAC  450

seq1  AGTATATTTCAATGCCTGTGACACTGAGGAAAATTCACAAATACAGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTCAATGCCTGTGACACTGAGGAAAATTCACAAATACAGTAGG  500

seq1  TGGAAACAATGGGTAGTTTTACTGGAAAAAGAGTACAATCAAACAGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAATGGGTAGTTTTACTGGAAAAAGAGTACAATCAAACAGAACA  550

seq1  TAAAAACAATCGCATATTATTCAAAGGTAAATGCCTAAATAAGTTGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAATCGCATATTATTCAAAGGTAAATGCCTAAATAAGTTGTAAA  600

seq1  ACCATTTTACTAACAGAAATAGTCCTTTCAAGCAATATAGATATTACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTACTAACAGAAATAGTCCTTTCAAGCAATATAGATATTACAAG  650

seq1  GCCACACATCCATGAAATTTTAAAGTAGCTAAGCCTAAAAAAAGAAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACATCCATGAAATTTTAAAGTAGCTAAGCCTAAAAAAAGAAAAAG  700

seq1  TTAATTATGATTGTGTGAGATTGGATGAACACACTTTTATCCTAAGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATGATTGTGTGAGATTGGATGAACACACTTTTATCCTAAGTAAA  750

seq1  AAGATTTATTTTGGAAGGTACAAAAGATATGTTGCATAACAAGTACACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTATTTTGGAAGGTACAAAAGATATGTTGCATAACAAGTACACTG  800

seq1  TCCACATCAAGATTAAATCATATAGCCTCAGGATTTGGGACAGTATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCAAGATTAAATCATATAGCCTCAGGATTTGGGACAGTATTTTA  850

seq1  TGATTTATACTGATGAATGGAAAATATATACTTGAGAGATATCAAGGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATACTGATGAATGGAAAATATATACTTGAGAGATATCAAGGCAG  900

seq1  AATAATAAATATCAAGCTCACCCATGAGTAACAGAAATTTTGCTGGAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAATATCAAGCTCACCCATGAGTAACAGAAATTTTGCTGGAGCA  950

seq1  ACGTATGTGTCAATGAATAGATATCTCAATTATCTATTAGTTATATTGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATGTGTCAATGAATAGATATCTCAATTATCTATTAGTTATATTGTT  1000

seq1  TGGGTGGTCTCAGATTTTTTTGAGACAGGG-TTTCTTTGTAGAACTG-CC  1048
       |||||||||||||  |||||||||||||| |||||||||||||||| ||
seq2  GGGGTGGTCTCAGA--TTTTTGAGACAGGGTTTTCTTTGTAGAACTGCCC  1048

seq1  TGTCCTGGAAATTGG-TACGTA-TGTGAAG  1076
      ||| ||| ||||||| |||||| |||||||
seq2  TGT-CTGCAAATTGGTTACGTATTGTGAAG  1077