BAC Information

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BAC

Clone NameB6Ng01-350F24
Chromosome13 (Build37)
Map Location 94,566,999 - 94,568,157
singlet/doubletsinglet
Overlap geneArsb
Upstream geneEG624619, EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh
Downstream geneCycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1, Tbca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350F24.bB6Ng01-350F24.g
ACCGA131064GA131065
length9061,132
definitionB6Ng01-350F24.b B6Ng01-350F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatatcaaatgcccgagaagcacctaaagaaatg
tttaacatccttagtcatcagggaaatgcaaatcaaaatgaccctgagat
tccacctcacaccagttagaatggctgagatcagaaattcaggtgagagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtacaaccattctggaaatcagtctggcggttcctca
gaaaactggacatagtactttctgaggacccagctataccactccaacat
ataacaaggcatatacctagaagatactccaacatataacaaggacacat
gttccactatgttcatagcagccatatttataatagccagaagctggaag
caactcagatgtgcctcaacagagaaaagaatacagaaaatatggtacat
ttacaaaatggagtattcctcagctattaaaaacaatgacttcacgaaat
tctcagacaaatggatggatctagaaaatatcatcctgaatgaggtaact
cagtcacaaaagaacacacatggtatgcattcactaataagtggatagta
ggcaaagactatggaatacccatgatacaactcacagaccacatgaagct
caagaggaaggaagaccaaaaagtagctgcttcagtcctacttagaagag
ggaacaataaaatcaagggaagtagagggtgggaagcactttcgaggaag
aaaggaaggggaaaggaaaaagaggggcagaattaggtatgggaggagat
ggaggagatgaacagagggtcaggaaattgaacagaaatgtatagcgatg
gggggattggggaacatgggggttactatctagaaattctagatgtctat
gaaagc
gaattcacaggaagtgttcaccaaccaactaacgtgtacttgcttttaag
gggcagctgagggagaaaatcgacagagctgccgtgtaacagttgagctg
ttgattctggggacgctgctaatggctttacatgtgtcaggaagggacat
cctttctcctttatgtgagggtgactcacatagtagtagcactataaaaa
gaaagtcatatattcatagcatgactttctgttaaaattagaacagcagc
actttgaagaacttaaaaaaacaaagaaccctctacatctaatctactag
aagcttcctaaggaaaacaaaacaataaatcctagtggaagactttcttt
gtgtgagtacaagctgggaagaaatgtcttaatttggttgtcaaagatag
aatagtagtttaaaaatgtattcctgtttttccaatttatactttgattt
agggagccctctaaagacataaaaatgagtgatatgtggtttcttcccat
agtgcggatgtttagagttcagatcttaggagccatggagcagaacagaa
aagggaaaagatccattagcatcctcaatgtacgtatgcagagttaagtc
tgggttttatgtgatactatagtgtctagacacgctttccaaaccaggat
tccattttatagtcttaggatacttgaaagggtcacagttagggttgggg
tacagttggcagctatgactgagctgatcggaataagagtttgaaatcaa
gaaaataccaaggacataccaggttctaagaaacagaaatcaaagctggg
tagtggtggtgcacgcctttaatcccagcacttgggaggcagaggcaggc
ggatttctgagttcgagggccagcctggtctacagagtgagttccaagga
cagccagggctacacagagaaaaaaccctgtctcaaaacaaacaaacaaa
caaaacaactaaacaacaaacaaacaaacaaacaaacaccagaatcagtg
gaggttaatgtggggcagacttcagtgtgatcaggagtcagtgaagtgag
agggtctctctcagtcaaggactcatgtcatagattcacatacattcccc
gatgagctgtgcttgtctagtgggagaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_94566999_94568157
seq2: B6Ng01-350F24.g_63_1194

seq1  GAATTCACAGGAAGTGTTCACCAACCAACTAACGTGTACTTGCTTTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGAAGTGTTCACCAACCAACTAACGTGTACTTGCTTTTAAG  50

seq1  GGGCAGCTGAGGGAGAAAATCGACAGAGCTGCCGTGTAACAGTTGAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCTGAGGGAGAAAATCGACAGAGCTGCCGTGTAACAGTTGAGCTG  100

seq1  TTGATTCTGGGGACGCTGCTAATGGCTTTACATGTGTCAGGAAGGGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTGGGGACGCTGCTAATGGCTTTACATGTGTCAGGAAGGGACAT  150

seq1  CCTTTCTCCTTTATGTGAGGGTGACTCACATAGTAGTAGCACTATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCCTTTATGTGAGGGTGACTCACATAGTAGTAGCACTATAAAAA  200

seq1  GAAAGTCATATATTCATAGCATGACTTTCTGTTAAAATTAGAACAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCATATATTCATAGCATGACTTTCTGTTAAAATTAGAACAGCAGC  250

seq1  ACTTTGAAGAACTTAAAAAAACAAAGAACCCTCTACATCTAATCTACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAGAACTTAAAAAAACAAAGAACCCTCTACATCTAATCTACTAG  300

seq1  AAGCTTCCTAAGGAAAACAAAACAATAAATCCTAGTGGAAGACTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCTAAGGAAAACAAAACAATAAATCCTAGTGGAAGACTTTCTTT  350

seq1  GTGTGAGTACAAGCTGGGAAGAAATGTCTTAATTTGGTTGTCAAAGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTACAAGCTGGGAAGAAATGTCTTAATTTGGTTGTCAAAGATAG  400

seq1  AATAGTAGTTTAAAAATGTATTCCTGTTTTTCCAATTTATACTTTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAGTTTAAAAATGTATTCCTGTTTTTCCAATTTATACTTTGATTT  450

seq1  AGGGAGCCCTCTAAAGACATAAAAATGAGTGATATGTGGTTTCTTCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCCCTCTAAAGACATAAAAATGAGTGATATGTGGTTTCTTCCCAT  500

seq1  AGTGCGGATGTTTAGAGTTCAGATCTTAGGAGCCATGGAGCAGAACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGGATGTTTAGAGTTCAGATCTTAGGAGCCATGGAGCAGAACAGAA  550

seq1  AAGGGAAAAGATCCATTAGCATCCTCAATGTACGTATGCAGAGTTAAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAGATCCATTAGCATCCTCAATGTACGTATGCAGAGTTAAGTC  600

seq1  TGGGTTTTATGTGATACTATAGTGTCTAGACACGCTTTCCAAACCAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTATGTGATACTATAGTGTCTAGACACGCTTTCCAAACCAGGAT  650

seq1  TCCATTTTATAGTCTTAGGATACTTGAAAGGGTCACAGTTAGGGTTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTATAGTCTTAGGATACTTGAAAGGGTCACAGTTAGGGTTGGGG  700

seq1  TACAGTTGGCAGCTATGACTGAGCTGATCGGAATAAGAGTTTGAAATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGCAGCTATGACTGAGCTGATCGGAATAAGAGTTTGAAATCAA  750

seq1  GAAAATACCAAGGACATACCAGGTTCTAAGAAACAGAAATCAAAGCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACCAAGGACATACCAGGTTCTAAGAAACAGAAATCAAAGCTGGG  800

seq1  TAGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC  850

seq1  GGATTTCTGAGTTCGA-GGCCAGCCTGGTCTACAGAGTGAGTTCC-AGGA  898
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  GGATTTCTGAGTTCGAGGGCCAGCCTGGTCTACAGAGTGAGTTCCAAGGA  900

seq1  CAGCCAGGGCTACACAGAG-AAAAACCCTGTCTCAAAAACAAAACAAAAC  947
      ||||||||||||||||||| ||||||||||||||||||   |||||||  
seq2  CAGCCAGGGCTACACAGAGAAAAAACCCTGTCTCAAAA--CAAACAAA--  946

seq1  AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAAACAAAACA  997
       |||||||||  ||| ||||  ||||||   |||||||| |||||||   
seq2  CAAACAAAAC--AACTAAAC--AACAAA--CAAACAAAC-AAACAAA--C  987

seq1  ACCAGAAATCAGTGGAGGTTAATGTGGGGCAGGACTTCAGTGTGAATCAG  1047
      ||||| ||||||||||||||||||||||||| |||||||||||| |||||
seq2  ACCAG-AATCAGTGGAGGTTAATGTGGGGCA-GACTTCAGTGTG-ATCAG  1034

seq1  GAGTCAGTGAGGTGAGAAGGGGTCTCTCTCCAAGGCCAAGGACCTCATGT  1097
      |||||||||| ||||||  |||||||||||    | |||||| |||||||
seq2  GAGTCAGTGAAGTGAGA--GGGTCTCTCTC---AGTCAAGGA-CTCATGT  1078

seq1  CCATAGATACACATACAATCCCCAGATGAAGGCTGTTTGCTTTGGCCAGT  1147
       ||||||| |||||||| ||||| |||||  ||||  ||| ||| | |||
seq2  -CATAGATTCACATACATTCCCC-GATGA--GCTG--TGC-TTGTCTAGT  1121

seq1  GGGGAGAAACTG  1159
       |||||||||||
seq2  -GGGAGAAACTG  1132