Query= MSMg01no045_c10.b1 MSMg01no045_c10.b1 CHROMAT_FILE:
MSMg01no045_c10.b1 PHD_FILE: MSMg01no045_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:02 2005
(289 letters)
>mm_chr13_26551640_26552328
Length = 689
Score = 489 bits (253), Expect = e-143
Identities = 271/285 (95%), Gaps = 14/285 (4%)
Strand = Plus / Plus
Query: 5 gaattctatgactttacttattcctttccccatccagtcccttccatatcccatacttcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatgactttacttattcctttccccatccagtcccttccatatcccatacttcc 264
Query: 65 atatcccacacttacttccatatcccacacttacttccatatcccacactacttccatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatcccacacttacttccatatcccacacttacttccatatcccacactacttccatat 324
Query: 125 cccacacttccatatccctccacacttaagttgatagcctcctttttattattgttccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccacacttccatatccctccacacttaagttgatagcctcctttttattattgttccac 384
Query: 185 acacacatatatacatatgtatatatatatgtatatatatgtatatatatatgtatatat 244
|||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 385 acacacatatatacatatgtatatatatat------------atatatatat--atatat 430
Query: 245 atatatatatatgaattctgagtattgtttttgtagtttctgtgt 289
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atatatatatatgaattctgagtattgtttttgtagtttctgtgt 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no045_c10.g1 MSMg01no045_c10.g1 CHROMAT_FILE:
MSMg01no045_c10.g1 PHD_FILE: MSMg01no045_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:02 2005
(450 letters)
>mm_chr13_26679909_26680758
Length = 850
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%)
Strand = Plus / Minus
Query: 1 ttgctttgatatatcttggtgttttacctttggcaaacagacatttgttcatgtcttcct 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 650 ttgctttgatatatcttggtgttttacctctggcaaacagacatttgttcatgtcttcct 591
Query: 61 aggaaaagttagacatgcacacaggtgcacatacttattttctctcagacaccattgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aggaaaagttagacatgcacacaggtgcacatacttattttctctcagacaccattgtcc 531
Query: 121 ccagctaccagacactagccatttaagcaaagattattagaaaaacctcgaagagaaact 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 530 ccagctaccagacactagccatttaagcaaagattattagaaaaaactcgaagagaaact 471
Query: 181 ttaccaggacactgcaactcaagaggaggtctgcaaataatagcttaggagttttatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttaccaggacactgcaactcaagaggaggtctgcaaataatagcttaggagttttatcct 411
Query: 241 ttacacatgacctttgcttccaaggtctccttcaaacaacatacagatatcatcctaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttacacatgacctttgcttccaaggtctccttcaaacaacatacagatatcatcctaaac 351
Query: 301 agccttccatttatctacttgagctgagttgaccccactggaaatcgaatgttgctgcag 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agccttcaatttatctacttgagctgagttgaccccactggaaatcgaatgttgctgcag 291
Query: 361 atattgatccagacacatagacactagtaaggctctctttgtgtgaaatttacagaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atattgatccagacacatagacactagtaaggctctctttgtgtgaaatttacagaagat 231
Query: 421 cctgttatacagagctctgaagtacagaca 450
||||||||||||||||||||||||||||||
Sbjct: 230 cctgttatacagagctctgaagtacagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
