Query= MSMg01no046_m04.b1 MSMg01no046_m04.b1 CHROMAT_FILE:
MSMg01no046_m04.b1 PHD_FILE: MSMg01no046_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:59 2005
(320 letters)
>mm_chr13_24296268_24296984
Length = 717
Score = 509 bits (263), Expect = e-148
Identities = 299/315 (94%), Gaps = 9/315 (2%)
Strand = Plus / Plus
Query: 6 gaattcacttttccttcgagtcttccctggcactccagctgtacaaggaccagcttgtgc 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcacttttcctttgagtcttccctggcactccagctgtacaaggaccagcttgtgc 265
Query: 66 agatggcccacctgcacaccgccacatgaacctcgggtgagctg---ctgtggcaatgag 122
|||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 266 agatggcccacctgcacaccgccacatgaacctcgggtgagctggtacta---caatgag 322
Query: 123 tgaccttagggcagccgtcctcagccacactcacagaccaaagccctcttccctctcaga 182
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 323 tgaccttagggcagccgtcctcagccacactctcagaccaaacccctcttccctctcaga 382
Query: 183 cacaataactaggacagctttattttaggatctccaccttcttctcttgttggcacacag 242
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 383 cacaataactagaacagctttattttaggatctccaccttct---cttgttggcacacag 439
Query: 243 tggacaaatgtacaatcaagaaaaacaatctagtaccctgtcaaaaacactttctctacc 302
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 tggacaaatgtacaataaagaaaaacaatctagtaccctggcaaaaacactttctctacc 499
Query: 303 cactgaaccactttt 317
|||||||||||||||
Sbjct: 500 cactgaaccactttt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 717
Length adjustment: 9
Effective length of query: 311
Effective length of database: 708
Effective search space: 220188
Effective search space used: 220188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_m04.g1 MSMg01no046_m04.g1 CHROMAT_FILE:
MSMg01no046_m04.g1 PHD_FILE: MSMg01no046_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:59 2005
(324 letters)
>mm_chr13_24463756_24464479
Length = 724
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 1 tccaaggaatgtcagtgtgtcaaaagggacaaaggtggacaggaacaactgagaagcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tccaaggaatgtcagtgtgtcaaaagggacaaaggtggacaggaacaactgagaagcaag 465
Query: 61 gggagataactgaaagctaagcaccagggcaggtaccacacctgagtgcaagccgtgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gggagataactgaaagctaagcaccagggcaggtaccacacctgagtgcaagccgtgata 405
Query: 121 aaaagaaatcacaaagttgcatcctgggcatgaaaggcttctttgataagattggatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaaagaaatcacaaagttgcatcctgggcatgaaaggcttctttgataagattggatcct 345
Query: 181 tgcagccaaactcttggaatcaagaggtatccatataagctgtcattttgacagcatggt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 344 tgcagccaaactcttggaatcaagaggtgtccatataagctgtcattttgacagcatggt 285
Query: 241 gtacactagtcttttctcatcccagctttcaaccgttagtggagaggaaaatgcccacaa 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtacactagtcttttctcatcacagctttcaaccgttagtggagaggaaaatgcccacaa 225
Query: 301 actcagaagccacgtgaggacatg 324
||||||||||||||||||||||||
Sbjct: 224 actcagaagccacgtgaggacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
