Query= MSMg01no046_n09.b1 MSMg01no046_n09.b1 CHROMAT_FILE:
MSMg01no046_n09.b1 PHD_FILE: MSMg01no046_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:04 2005
(298 letters)
>mm_chr13_48582500_48583197
Length = 698
Score = 545 bits (282), Expect = e-160
Identities = 291/294 (98%)
Strand = Plus / Plus
Query: 5 gaattctagtgttttctaggatggagtgtttgtcattgttatggatcaggtctggagtgt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagtgttttgtaggatggagtgtttgtcattgttatggatcaggtctggagtgt 264
Query: 65 attgagggtacacatgccacggctcatgtggaagtcagaagatagtgttgggtctcttct 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgagggtacacatgccacagctcatgtggaagtcagaagatagtgttgggtctcttct 324
Query: 125 atgtggattctggggatggacctcaggtcctcggatttccgtgctgtcttgctaccccca 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtggattctggggatgaacctcaggtcctcggatttccgtgctgtcttgctaccccca 384
Query: 185 aatggaggtattttaagaaatgttaagttaaaaatagccagataagatttctacacagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatggaggtattttaagaaatgttaagttaaaaatagccagataagatttctacacagat 444
Query: 245 gatcaaagtgtgcccttatttgctcttgctgcatctagcaaaatgggacgacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatcaaagtgtgcccttatttgctcttgctgcatctagcaaaatgggacgacag 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_n09.g1 MSMg01no046_n09.g1 CHROMAT_FILE:
MSMg01no046_n09.g1 PHD_FILE: MSMg01no046_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:04 2005
(280 letters)
>mm_chr13_48705644_48706324
Length = 681
Score = 505 bits (261), Expect = e-147
Identities = 276/281 (98%), Gaps = 1/281 (0%)
Strand = Plus / Minus
Query: 1 tcttgaagaa-attaattcagcagcagtttctttaaatgatgaaataggagggtttgtgg 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 tcttgaagaatattaattcagcagcagtttctttaaatgatgaaataggagggttcgtgg 422
Query: 60 agtgttgtttttccatgctgtgtgacttgtctcttgggaaccttgcaatcagcttgcaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtgttgtttttccatgctgtgtgacttgtctcttgggaaccttgcaatcagcttgcaga 362
Query: 120 cttccctaaggtgtagttcaggtgtgagatcacagaaactgctaagtagatttgtcagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttccctaaggtgtagttcaggtgtgagatcacagaaactgctaagtagatttgtcagat 302
Query: 180 ggcctcagctctttccccgaggattgctggaagctgttttaatagtatccaagcctgcat 239
|||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 ggcctcagctctctccctgaggattgctggaagctgttttaatagtgtccaagcctgcat 242
Query: 240 aggtgagcctttcttcagatgtgagtcccatatatagttgg 280
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggtgagcctttcttcagatgtgagtcccatatatagttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 681
Length adjustment: 9
Effective length of query: 271
Effective length of database: 672
Effective search space: 182112
Effective search space used: 182112
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
