Query= MSMg01no054_d07.b1 MSMg01no054_d07.b1 CHROMAT_FILE:
MSMg01no054_d07.b1 PHD_FILE: MSMg01no054_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:20 2005
(352 letters)
>mm_chr13_51827417_51828167
Length = 751
Score = 619 bits (320), Expect = 0.0
Identities = 340/348 (97%), Gaps = 5/348 (1%)
Strand = Plus / Minus
Query: 7 gaattcaaatga--tccccgctgtagcttctgtagcggaaatttccttattctcttgggc 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattcaaatgaggt--gcgctgtagcttctgtagcggaaatttccttattctcttgggc 510
Query: 65 actaaagcaccactgccagtgaccccctgggtaagctgtctcctggtgtatacagtgctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 actaaagcaccactgccagtgaccccctgggtaagctgtctcctggtgtatacagtgctg 450
Query: 125 gcttcctgggctgggtttcgatattaattggctctctggttagaggcagctgcctctgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gcttcctgggctgggtttcgatattaattggctctctggttagaggcagctgcctctgtt 390
Query: 185 ctgcaggtcgaagcttagggctgagccatgcaggttccgtgtctggggaaggccccctct 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 389 ctgcaggtcgaagcttagggctgagccatgcaggttccgtgtctggggaagg-cccctct 331
Query: 245 tgactgctcgtggtgctttattgtgtcccatctggtgagaagggaaagggagactgttct 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggctgctcgtggtgctttattgtgtcccatctggtgagaagggaaagggagactgttct 271
Query: 305 gtggagcatcctcaagagccttcgtgacctcgtgaccttgaagaggcc 352
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 270 gtggagcatcctcaagagccttcctgacctcgtgaccttgaagaggcc 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 751
Length adjustment: 9
Effective length of query: 343
Effective length of database: 742
Effective search space: 254506
Effective search space used: 254506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_d07.g1 MSMg01no054_d07.g1 CHROMAT_FILE:
MSMg01no054_d07.g1 PHD_FILE: MSMg01no054_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:20 2005
(280 letters)
>mm_chr13_51676732_51677411
Length = 680
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%)
Strand = Plus / Plus
Query: 1 tccctgagcaaagtacttgctgtacaacaacaaaagtacctgagtttacatccccagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctgagcaaagtacttgctgtacaacaacaaaagtacctgagtttacatccccagcat 260
Query: 61 ccacgtaaaaatctgctattggcagtgcaggtacccataaccttagcatggggagaaaca 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacataaaaatctgctattggcagtgcaggtacccataaccttagcatggggagaaaca 320
Query: 121 cggatagacagacctcctaaaactcatcctacacaggctcatcacagcccaagtggggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cggatagacagacctcctaaaactcatcctacacaggctcatcacagcccaagtggggga 380
Query: 181 gggtgctgtctatcttggaagcacatgaccctcaacatcatattggccctgccctcaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgctgtctatcttggaagcacatgaccctcaacatcatattggccctgccctcaaat 440
Query: 241 gtcgggccactccctcatcgacaggtgactacagtgtcca 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcgggccactccctcatcgacaggtgactacagtgtcca 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
