XXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGAATTCTATTT
AGCTCTGTTCCCCATTTTTAATAGGGTTATTTGGTTCTCTGGAGTCTAAT
TTCTTGAGTTCTTTGTATATATTGGATATTAACCCTCTATCTGATGAAGA
ATTGGTAAAGGTCTTTTCCCAACCTGTTGGTTGCTGTTTATTTCTATTGA
CAGTGTTCTTTGCCTTACAGAAGCTTTATAATTTTATGAGGTCCCATTTG
TCGATTCTTGATCTAGGGCATAAGCCATTGGTGTTCCATTCAGGAATTTT
TCCCTGTGTCCATGTGTTCGAGGCTGTTCTAGTTAGAAATTCAAGTGCTA
TATTATATAGATAGGGAGAGAGAGGGCAGCCTTGTCTAGTCCCCGATTTT
AGTGGGATTGCTTCAACTTTCTCTCCATTTAGTTTGATGTTAGCTACTGG
TTTGCTGTATATTGCTTTTACTATGTTTAAGTATGGGCCTTGAATTCCTG
ATCTCTCCAAAACTTTTAACATGAAGGAATGTTGAATTTTGTCAATTGTT
TTTTCAGCATCTAATGCAATGATCATGTGGTTTTTTTCTTTGAGTTTTTT
TTTTTAATGTAGTGGATTACATTGATGTATTTCTCTATATTGAGTGATCC
CTGCATCCTGGGGATGAAGCCTATTTGATCATGGCAAATGATATGCT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTTCCCCACGGAATTCCTGGAGGCCTTAATAAGTATATTTAGGGG
AGCTGGAGAGATGGCTCAGTGGTTAACGCACATATTGCTCTGATAGAAGA
CCTGCGTTGGGTTCCAGGTCTCGTATCTGGCAGCTCACAATTGCCTATTA
TTCCAACTCCCGGGGATTCAACACTTCTGACCTCATAGATGTCTGTGTTC
ACTCAAACATACTCACATATATGTACAAGCACACTATACACTACTAAAAG
TAATGAAATAATTTTCTTTTTAGAAGTATATATAGAAATTAAATAATCAT
TAATACTGTACTGAAAACAACATTTAGTTGAGCCTTTGTGTAAGAAATGT
TAATATTTTAGTTACATAGACTAGTAAATATATGTGATAGTATTTTAGTG
GTCCAAATATATTGTACTACCACTGCAAAGTTGACCTTTGAAATATTGTA
ATAGACAAAAATTAAACAGTTTGAACTTGTTGGTATAGATAAGCTCTTAA
AAACTGAAGCCGGAGACTGGATATAAATCAGAGGGAAAGTCCCTGATTAA
TATGTACTGGGACAGTTCAACCTCAAGAACCAACAAAAGCAAATAAGAAG
ATAGTTTCAGACTCCTTTGTTGTTTATACTGGGTGTAGCTTACACTATGA
AGTGG

Query= MSMg01no054_d16.g1 MSMg01no054_d16.g1 CHROMAT_FILE:
MSMg01no054_d16.g1 PHD_FILE: MSMg01no054_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:22 2005
         (609 letters)



>mm_chr13_84141118_84142128
          Length = 1011

 Score = 1116 bits (577), Expect = 0.0
 Identities = 599/607 (98%), Gaps = 2/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcctggaggccttaataagtatatttaggggagctggagagatggctcagtggttaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctggaggccttaataagtatatttaggggagctggagagatggctcagtggttaac 260

                                                                       
Query: 61  gcacatattgctctgatagaagacctgcgttgggttccaggtctcgtatctggcagctca 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gcacatattgctctgatagaagacctgcattgggttccaggtctcgtatctggcagctca 320

                                                                       
Query: 121 caattgcctattattccaactcccggggattcaacacttctgacctcatagatgtctgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caattgcctattattccaactcccggggattcaacacttctgacctcatagatgtctgtg 380

                                                                       
Query: 181 ttcactcaaacatactcacatatatgtacaagcacactatacactactaaaagtaatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcactcaaacatactcacatatatgtacaagcacactatacactactaaaagtaatgaa 440

                                                                       
Query: 241 ataattttctttttagaagtatatata--gaaattaaataatcattaatactgtactgaa 298
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 441 ataattttctttttagaagtatatatatagaaattaaataatcattaatactgtactgaa 500

                                                                       
Query: 299 aacaacatttagttgagcctttgtgtaagaaatgttaatattttagttacatagactagt 358
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataatatttagttgagcctttgtgtaagaaatgttaatattttagttacatagactagt 560

                                                                       
Query: 359 aaatatatgtgatagtattttagtggtccaaatatattgtactaccactgcaaagttgac 418
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 aaatatatgtgatagtattttagtggtccaaatatattgtactaccactggaaagttgac 620

                                                                       
Query: 419 ctttgaaatattgtaatagacaaaaattaaacagtttgaacttgttggtatagataagct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttgaaatattgtaatagacaaaaattaaacagtttgaacttgttggtatagataagct 680

                                                                       
Query: 479 cttaaaaactgaagccggagactggatataaatcagagggaaagtccctgattaatatgt 538
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 681 cttaaaaactgaagccggagactggatataaatcagagggaaagcccctgattaatatgc 740

                                                                       
Query: 539 actgggacagttcaacctcaagaaccaacaaaagcaaataagaagatagtttcagactcc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actgggacagttcaacctcaagaaccaacaaaagcaaataagaagatagtttcagactcc 800

                  
Query: 599 tttgttg 605
           |||||||
Sbjct: 801 tttgttg 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1011
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1001
Effective search space:   599599
Effective search space used:   599599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)