Query= MSMg01no057_n05.b1 MSMg01no057_n05.b1 CHROMAT_FILE:
MSMg01no057_n05.b1 PHD_FILE: MSMg01no057_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:54 2005
(331 letters)
>mm_chr13_24268138_24268868
Length = 731
Score = 625 bits (323), Expect = 0.0
Identities = 329/331 (99%)
Strand = Plus / Minus
Query: 1 ggctacatggtgggtttaaggccagcctaggcaatatgagagatagtattaggaaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggctacatggtgggtttaaggccagcctaggcaatatgagagatagtattaggaaaagaa 370
Query: 61 aaggagaagactcctaggtaatatctgggtaaggatgtgagaaatctcaaatgtgtggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaggagaagactcctaggtaatatctgggtaaggatgtgagaaatctcaaatgtgtggaa 310
Query: 121 ataggcacacacttgagtcacatgtctcagatcagtcacaaagaaatagctaggcagggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 309 ataggcacacacttgagtcacatgtctcagatcagtcacaaagaaatagctaggtagggt 250
Query: 181 gacacacacctatagttccagtgtttgggagagttggagacagggggatggctgtgaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gacacacacctatagttccagtgtttgggagagttggagacagggggatggctgtgaatt 190
Query: 241 caaggtacttctggtctatacagtgaaatatgagccagtttaaaaaggaatgggagaaga 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 caaggtacttctgggctatacagtgaaatatgagccagtttaaaaaggaatgggagaaga 130
Query: 301 agggtgggcaggggaaatggagtttatgtgg 331
|||||||||||||||||||||||||||||||
Sbjct: 129 agggtgggcaggggaaatggagtttatgtgg 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_n05.g1 MSMg01no057_n05.g1 CHROMAT_FILE:
MSMg01no057_n05.g1 PHD_FILE: MSMg01no057_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:54 2005
(230 letters)
>mm_chr13_24119514_24120143
Length = 630
Score = 323 bits (167), Expect = 5e-93
Identities = 213/239 (89%), Gaps = 21/239 (8%)
Strand = Plus / Plus
Query: 1 cattaggaaaatacagcatttgctgctataaatttataaaatatttaggcatctggc-tc 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 204 cattaggaaaatacagcatttgctgctataaatttataaagtatttaggcatctggcatc 263
Query: 60 acggtggggttgaagtatttttcagcatcc--caaatagt------caataggcaccggc 111
||||||||||||||||| || || |||| ||||||||||||||
Sbjct: 264 ----------tgaagtatttttcagcaccctgca--tagtgaaggtcaataggcaccggc 311
Query: 112 agaagacagttatgcaggctctcccaactttgggctatagcaagggtctgaggggcagag 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agaagacagttatgcaggctctcccaactttgggctatagcaagggtctgaggggcagag 371
Query: 172 taagggaggtagctgttgctggtaaattgctgggtagaactatggagaacagctgcaaa 230
|||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 372 taagggaggtagctgtagctgggaaattgttgggtagaactatggagaacagctgcaaa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
