TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTAGCCTTGAGCCCCATTTTTAATGGGGTTATTTGATTTTC
TGGAGTCCACCTTCTTGAGTTCTTCATATACATATTGAATATTAGTCCCC
TATATGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTAT
AAGGTCCCATTTGTCGATTCTAGATCTTAAAGAACAAGCCATTTCTGTTC
TATTCAGGAATTTTTCCCCTGTTCCCATATCTTCGAGGATTTTCCCTACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAAT
CTACTTCGATTCGACTGTAGTACAAGGAGATAGGAATGGATCAATTTTCA
TCCTTCTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTTTTCCACTGGATGGTTTTTTGCTCCCTTGTCAAAGATCGAGT
GACCATAGGTGTGTGGGTTCATCTCTGGGTCTTCAATTCTATTCCACTGG
TCTACTTGACTGTTGCTATACCAGTACCATGCAGTTTTTATCACAATTGT
TCTGTAGCACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGGTCTTT
TTATCCTTGAGAAGACATTTTTGCTATCCCA

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTGAAGAAAGCATCTTGTACAGTCACTCAA
ATGTTTGTACTACAAACAAAAGGGGCTTAAGATCCACTGGGGATATAAAA
TACAAGCTTTGTTATGAAACAAAATAGGCACAGCATTTCTTTCAGAACTA
TGTAACAACATTTTTCAAGTTGAAGATGAAAGGATTTCCCTTCAGTTGGT
GACAAACAATATACTCTCACTGAAAATCCTTGACTTAGTTTCAAGATCAA
TTATTTCCATTAACAGTCAGAAATTGCATTTAAAGTTTCATCGATTATTC
CTATTAACAGGGAAAAACTTGCACTTTAAATTTTATCATTACCCAGATGT
CCCTCAGCAGATGAATGGATACAGAAAATGTGGTACATTTACACAATGGA
GCAATTAAACAATGAATGTATGAATTTCTTAGGCAAATGGATGGATCTGG
AGGATATCATCCTGAGTGAGTTAACCCAATCACAAAAGAACACACATGAT
ATGCATTCACTGATAATCAGGGTTAGGATTAGGGTTAGGGTTAGGGTTAG
GGTTAGCCCCCCCCCCTCTTCCCCCTTNCTCTCCCCTTCCCTTCCCCTCC
CCTTTCTCTCTTTCCCCCCCCTCCCCCCCTCTTTTTCCCA

Query= MSMg01no060_b14.g1 MSMg01no060_b14.g1 CHROMAT_FILE:
MSMg01no060_b14.g1 PHD_FILE: MSMg01no060_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:45 2005
         (523 letters)



>mm_chr13_116983177_116984099
          Length = 923

 Score =  959 bits (496), Expect = 0.0
 Identities = 514/520 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgaagaaagcatcttgtacagtcactcaaatgtttgtactacaaacaaaaggggcttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctgaagaaagcatcttgtacagtcactcaaatgtttgtactacaaacaaaaggggcttaa 461

                                                                       
Query: 61  gatccactggggatataaaatacaagctttgttatgaaacaaaataggcacagcatttct 120
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaggcactggggatataaaatacaagctttgttatgaaacaaaataggcacagcatttct 401

                                                                       
Query: 121 ttcagaactatgtaacaacatttttcaagttgaagatgaaaggatttcccttcagttggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttcagaactatgtaacaacatttttcaagttgaagatgaaaggatttcccttcagttggt 341

                                                                       
Query: 181 gacaaacaatatactctcactgaaaatccttgacttagtttcaagatcaattatttccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gacaaacaatatactctcactgaaaatccttgacttagtttcaagatcaattatttccat 281

                                                                       
Query: 241 taacagtcagaaattgcatttaaagtttcatcgattattcctattaacagggaaaaactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taacagtcagaaattgcatttaaagtttcatcgattattcctattaacagggaaaaactt 221

                                                                       
Query: 301 gcactttaaattttatcattacccagatgtccctcagcagatgaatggatacagaaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gcactttaaattttatcattacccagatgtccctcagcagatgaatggatacagaaaatg 161

                                                                       
Query: 361 tggtacatttacacaatggagcaattaaacaatgaatgtatgaatttcttaggcaaatgg 420
           |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||
Sbjct: 160 tggtacatttacacaatggagctattaaacaatgactgtatgaatttattaggcaaatgg 101

                                                                       
Query: 421 atggatctggaggatatcatcctgagtgagttaacccaatcacaaaagaacacacatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggatctggaggatatcatcctgagtgagttaacccaatcacaaaagaacacacatgat 41

                                                   
Query: 481 atgcattcactgataatcagggttaggattagggttaggg 520
           ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 40  atgcattcactgataatcagggttagggttagggttaggg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)