Query= MSMg01no060_f08.b1 MSMg01no060_f08.b1 CHROMAT_FILE:
MSMg01no060_f08.b1 PHD_FILE: MSMg01no060_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:02 2005
(574 letters)
>mm_chr13_30718611_30719583
Length = 973
Score = 1009 bits (522), Expect = 0.0
Identities = 528/530 (99%), Gaps = 1/530 (0%)
Strand = Plus / Minus
Query: 45 cagagctggagagacggctcagctgttaagagcactgactgctcttctagagatcctgag 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 cagagctggagagacggctcagctgttaagagcactgactgctcttctagagatcctgag 914
Query: 105 ttcaattcccagcaaccacatagtgtgactcacaaccatctgtaatggggatccaatgcc 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ttcaattcccagcaaccacatagtgtgactcacaaccatctgtaatggggatccaatgcc 854
Query: 165 ctcttctggtgtgtctgaagacagctacagtgtgctcacatacatgaaataaataattaa 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ctcttctggtgtgtctgaagacagctacagtgtgctcacatacatgaaataaataattaa 794
Query: 225 atcttaaaaaaaagaaaagaaaaaagaaaaacagaaaaaggcaaagatagttgtggcatc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 atcttaaaaaaaagaaaagaaaaaagaaaaacagaaaaaggcaaagatagttgtggcatc 734
Query: 285 aatttaatatctttataatttatctcgggctatccattacttatttcataacattctaag 344
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aatttaatatctttataatttctctcgggctatccattacttatttcataacattctaag 674
Query: 345 tctttgggttttttttttgttaacattccgcatgttgagataattcctctgccacaggta 404
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tctttggg-tttttttttgttaacattccgcatgttgagataattcctctgccacaggta 615
Query: 405 gaaatgaactgtctttaacttgcttcatatctgagctaagctaccgatgcgaatcagtga 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaaatgaactgtctttaacttgcttcatatctgagctaagctaccgatgcgaatcagtga 555
Query: 465 gtcacagccttgatttagagagcgctttcagagaccatacctgtcttaccattctaaagc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtcacagccttgatttagagagcgctttcagagaccatacctgtcttaccattctaaagc 495
Query: 525 aagaatctctgttgaacttgggtttcctgtgtgtggcttacagtatcaga 574
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aagaatctctgttgaacttgggtttcctgtgtgtggcttacagtatcaga 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 973
Length adjustment: 10
Effective length of query: 564
Effective length of database: 963
Effective search space: 543132
Effective search space used: 543132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_f08.g1 MSMg01no060_f08.g1 CHROMAT_FILE:
MSMg01no060_f08.g1 PHD_FILE: MSMg01no060_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:02 2005
(413 letters)
>mm_chr13_30613187_30613999
Length = 813
Score = 723 bits (374), Expect = 0.0
Identities = 404/414 (97%), Gaps = 2/414 (0%)
Strand = Plus / Plus
Query: 1 ctgcgacagtacagcgctcccttaacaggaaaactgataatgtttatgcaatcttcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctgcgacagtacagcgctcccttaacaggaaaactgataatgtttatgcaaagttcgtgc 260
Query: 61 tctaagaaaacgaagggagaattctaatacgtggttctatggctctcatcgtttccaggc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 261 tctaagaaaacgaagggagaattctaatacgtggttctaaggctctcatcgtttccaagc 320
Query: 121 tacttactgttttcatgcttccacagagaaggtagtgggataaggggagggcagaaagcg 180
| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 321 ttcttattgttttcatgcttccacagaaaaggtagtgggataaggggagggcggaaagcg 380
Query: 181 ctgaagttgcccttgacacagctcaaatgtgtttgcttac-attagtcctttccaacgat 239
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 381 ctgaagttgcccttgacacagctcaaatgtgtttgctt-cgattagtcctttccaacgat 439
Query: 240 aagggaagaaaagataatgtgcaggcgcccatcatcgtgacagatgacttgaaagaaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagggaagaaaagataatgtgcaggcgcccatcatcgtgacagatgacttgaaagaaaca 499
Query: 300 ggaagggaagtgaaataaaatccaattctccctaatctccttcctaaaccaccactttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggaagggaagtgaaataaaatccaattctccctaatctccttcctaaaccaccactttgg 559
Query: 360 cttgggactgtctgaatattctgcatggaatctcatggtgacctagctttctct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttgggactgtctgaatattctgcatggaatctcatggtgacctagctttctct 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
