Query= MSMg01no061_j22.b1 MSMg01no061_j22.b1 CHROMAT_FILE:
MSMg01no061_j22.b1 PHD_FILE: MSMg01no061_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:39 2005
(684 letters)
>mm_chr13_30105584_30106664
Length = 1081
Score = 1183 bits (612), Expect = 0.0
Identities = 663/682 (97%), Gaps = 5/682 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctataaggcacattcatccttccatatgaatctagaagtagtcatacttttc 63
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctataaggcagattcatccttccgtatgaatctagaagtagtcatacttttc 263
Query: 64 ctttgagtataaatgagaccctgttttgtatgacaccgaactcctgacttggttatagtt 123
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||
Sbjct: 264 ctttgagtataaatgagaccctgttttgtacgacaccaaactcctgacttggttatggtt 323
Query: 124 cttttccagattggctttttctgtaaaaggctttgcatatgaaaactaacaatggtcttc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttttccaggttggctttttctgtaaaaggctttgcatatgaaaactaacaatggtcttc 383
Query: 184 cttgagccttttgtattagaaagcactgttttttatctccaactttcaaatatctcccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttgagccttttgtattagaaagcactgttttttatctccaactttcaaatatctcccag 443
Query: 244 ataactagggtgatggagagcagggaattgtttcaatgtatcacacaaactgggtttgct 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 ataactagggtgatggagagcagggaattgtttcaatgtaccacacaaactgggtttgct 503
Query: 304 ataaccgca-cccctagaaacgggtctccctggagagcaggaagagagtggagccatggg 362
||||| ||| ||||||||||| ||| |||||||| |||||||||||| |||||||||
Sbjct: 504 ataactgcaccccctagaaacaggt----ctggagagtaggaagagagtgaagccatggg 559
Query: 363 cataggttttagagccagactgcttcctttcatgtctgccattggcctttcctagctctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cataggttttagagccagactgcttcctttcatgtctgccattggcctttcctagctctc 619
Query: 423 tgagcaaacttgaacaacttcctcagcttactgcacccttgcttcctcatctctataatg 482
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 620 tgagcaaacttgaacaacttcctcagcttactgcgcccttgcttcctcatctctataatg 679
Query: 483 gaagagtctatttatctgtctcttagggcttctgcgaaacgtaactgagttgctttgtgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaagagtctatttatctgtctcttagggcttctgcgaaacgtaactgagttgctttgtgt 739
Query: 543 gatgcatttagaacggtgcctagtctagtgtacctacttaatatatatcaatgaccatcg 602
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatgcagttagaacggtgcctagtctagtgtacctacttaatatatatcaatgaccatcg 799
Query: 603 tctttgctttcctactggcatttgttcattacctaatctaataaccccgctgatagaaag 662
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 800 tctttgctttcctactggcatttgtttattacctaatctaataaccccgctgatagaaag 859
Query: 663 tcgagggcaggaagtggaacag 684
||||||||||||||||||||||
Sbjct: 860 tcgagggcaggaagtggaacag 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1081
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1071
Effective search space: 721854
Effective search space used: 721854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_j22.g1 MSMg01no061_j22.g1 CHROMAT_FILE:
MSMg01no061_j22.g1 PHD_FILE: MSMg01no061_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:39 2005
(634 letters)
>mm_chr13_30127981_30129014
Length = 1034
Score = 1203 bits (622), Expect = 0.0
Identities = 631/634 (99%)
Strand = Plus / Minus
Query: 1 taatgagtttccttaactcccttcttggcccctcaccctgccaaaatgagtagttacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 taatgagtttccttaactcccttcttggcccctcaccctgccaaaatgagtagttacata 775
Query: 61 aaaacaaacaacaaaccaacaaacaaaaaccagacagctgtgcctcgagatcacattgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aaaacaaacaacaaaccaacaaacaaaaaccagacagctgtgcctcgagatcacattgcc 715
Query: 121 ctaggagatttagcgctcaaaggtctggccacacccactatgactcatcggcctggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctaggagatttagcgctcaaaggtctggccacacccactatgactcatcggcctggtggg 655
Query: 181 taactaacctttggccagtcatgaaagacgtttatgggaagagggggtgtgattgctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 taactaacctttggccagtcatgaaagacgtttatgggaagagggggtgtgattgctgct 595
Query: 241 tgatccctcatgctagtatcttctcgagcaaatcctgtctctcttatcagacaaaaggac 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgatctctcatgctagtatcttctcgagcaaatcctgtctctcttatcagacaaaaggac 535
Query: 301 acgtaggcagttgcgattttctcccggcccctttctctgcatcagcaccctacagatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acgtaggcagttgcgattttctcccggcccctttctctgcatcagcaccctacagatctg 475
Query: 361 cttgaatgtcaggaaacagaaacttttacctctggtttttctaccagcaggcacttcaga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 474 cttgaatgtcaggaaacagaaacttttacctctggtttttctaccagcaggcactttaga 415
Query: 421 tagactggatacccatgaaggcgtcatctgtttgattctgtcttggagaattcaaggctt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tagcctggatacccatgaaggcgtcatctgtttgattctgtcttggagaattcaaggctt 355
Query: 481 tatgtgatgtcttttctatatgaatcaataactcgtgtaattccacctcaaaggctacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tatgtgatgtcttttctatatgaatcaataactcgtgtaattccacctcaaaggctacaa 295
Query: 541 agttactctttgctgggcaaatagagacacaaacatcacctccactctattcgttcaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 agttactctttgctgggcaaatagagacacaaacatcacctccactctattcgttcaaca 235
Query: 601 aatatccatgtagcgtctactcacactcagcttg 634
||||||||||||||||||||||||||||||||||
Sbjct: 234 aatatccatgtagcgtctactcacactcagcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
