Query= MSMg01no062_d24.b1 MSMg01no062_d24.b1 CHROMAT_FILE:
MSMg01no062_d24.b1 PHD_FILE: MSMg01no062_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:38 2005
(652 letters)
>mm_chr13_4437101_4438151
Length = 1051
Score = 1228 bits (635), Expect = 0.0
Identities = 648/653 (99%), Gaps = 3/653 (0%)
Strand = Plus / Minus
Query: 1 taaaattaactgaactatgtttttaaactttatagaatccaaccaaccagaaaacttata 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 851 taaaattaactgaactatgtttttaaactttatagaatccaaccaaccaaaaaacttata 792
Query: 61 aattagagctgaagtttgttggttatccatactgcataccttcatggccattgggaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aattagagctgaagtttgttggttatccatactgcataccttcatggccattgggaaatg 732
Query: 121 aatgaggtacaggtccacatagtccaactggagttgcttcaatgactgttccaagcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aatgaggtacaggtccacatagtccaactggagttgcttcaatgactgttccaagcagac 672
Query: 181 ccgtacgagttctggacgatgaaaagtacaccaaacctgaaaatgttgaagaatggattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccgtacgagttctggacgatgaaaagtacaccaaacctgaaaatgttgaagaatggattt 612
Query: 241 aactttgaattattgaatttccagagtttgctcagttactttacctaacacagacactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aactttgaattattgaatttccagagtttgctcagttactttacctaacacagacactgg 552
Query: 301 tgtgacattgacaatcatgggagataatattttcttcttcttgaattcgttttccaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtgacattgacaatcatgggagataatattttcttcttcttgaattcgttttccaactg 492
Query: 361 atcaatccacaaagctttcatgttatgataatttatcctcaaacttttatttcactgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atcaatccacaaagctttcatgttatgataatttatcctcaaacttttatttcactgaac 432
Query: 421 ttataaaagactttaagcatctaatacactataactgtttctgcatatatattatgatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttataaaagactttaagcatctaatacactataactgtttctgcatatatattatgatgt 372
Query: 481 gttgtgtttggttaacatatatgagttagagtggatctgatgcccccttctggtactcat 540
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 371 gt--tgtttggttaacatatatgagttagagtggatctgatgcccctttctggtactcat 314
Query: 541 ggtacacatatacccttgcagtcaaggcactaatatacttacaataaatactttttttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggtacacatatacccttgcagtcaaggcactaatatacttacaataaatactttttttaa 254
Query: 601 agcacac-tgggggaagaaagataacctataataatactagtcagaggacatg 652
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agcacacatgggggaagaaagataacctataataatactagtcagaggacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_d24.g1 MSMg01no062_d24.g1 CHROMAT_FILE:
MSMg01no062_d24.g1 PHD_FILE: MSMg01no062_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:39 2005
(255 letters)
>mm_chr13_4297156_4297810
Length = 655
Score = 344 bits (178), Expect = 2e-99
Identities = 195/202 (96%), Gaps = 3/202 (1%)
Strand = Plus / Plus
Query: 1 aatttgtaattttataagtcaacatttattaacatcattatgtaacctcactttacagtg 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aatttgtaatttcataagtcaacatttattaacatcattatgtaacctcaatttacagtg 260
Query: 61 tatatacaagattctactcagtcatgaccatctgctacaagtattttcaaacctaaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatacaagattctactcagtcatgaccatctgctacaagtattttcaaacctaaatgc 320
Query: 121 tccacttctcatttttaggactcagatactgaactgatgcgaggaacctgggcactgcca 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 321 tccacttctcatttttaggactcagatactgaactgatgggaggaacctgggcactgtca 380
Query: 181 gttattctt---agatatgtat 199
||||||||| ||||||||||
Sbjct: 381 gttattcttcttagatatgtat 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
