Query= MSMg01no062_p11.b1 MSMg01no062_p11.b1 CHROMAT_FILE:
MSMg01no062_p11.b1 PHD_FILE: MSMg01no062_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:07 2005
(630 letters)
>mm_chr13_47095863_47096892
Length = 1030
Score = 584 bits (302), Expect = e-171
Identities = 320/326 (98%)
Strand = Plus / Minus
Query: 1 ctttctgaccagactatggtgtaaggctgggtcaatgttgggggcaacttcaacaaataa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctttctgaacagactatggtgtaaggctgggtcaatgttgggggcaacttcaacaaataa 288
Query: 61 gtaccaaatggtaggccaggaaagacccccctctctccaagcttggaggcccaaaagaac 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gtaccaaatggtagtccaggaaagacccccctctctccaagcttggaggcccaaaagaac 228
Query: 121 tcttctaattcatcttcttgtcacttaagaggagcaggaatagtagagtgtgcgtatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcttctaattcatcttcttgtcacttaagaggagcaggaatagtagagtgtgcgtatgtg 168
Query: 181 tatgtattataagaggagattggtagaatagcttacaccataggatttgagtaggctaac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tatgcattataagaggagattggtagaatagcttacaccataggatttgagtaggctaac 108
Query: 241 aatggcagtctgcaggctctaggagcatattaaaggtggctgcttacttagtccatgaag 300
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 107 aatggcagtctgcaggctctaggagcagagaaaaggtggctgcttacttagtccatgaag 48
Query: 301 cctcaacagtcccaatctgtaacgaa 326
||||||||||||||||||||||||||
Sbjct: 47 cctcaacagtcccaatctgtaacgaa 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_p11.g1 MSMg01no062_p11.g1 CHROMAT_FILE:
MSMg01no062_p11.g1 PHD_FILE: MSMg01no062_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:07 2005
(659 letters)
>mm_chr13_46950368_46951425
Length = 1058
Score = 1205 bits (623), Expect = 0.0
Identities = 650/659 (98%), Gaps = 1/659 (0%)
Strand = Plus / Plus
Query: 1 gagaggaacaccagagccaccaaccagccttactagtcagctccgctgacagacctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaggaacaccagagccaccaaccagccttactagtcagctccgctgacagacctctct 260
Query: 61 tcctgtttaaaagtctgtcaagtcaacgctgtcttttcacagtgtaattaatcatttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgtttaaaagtctgtcaagtcaacgctgtcttttcacagtgtaattaatcatttctt 320
Query: 121 tcacacacacttgtaactacacaccacatgatgtcttgggcttcacagtcaaccctgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacacacacttgtaactacacaccacatgatgtcttgggcttcacagtcaaccctgcct 380
Query: 181 ggctgaagattcacagcagctaacagcatctgcagcacacacacccacaagaaataaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgaagattcacagcagctaacagcatctgcagcacacacacccacaagaaataaacc 440
Query: 241 attgccccaagctcagagaccccatcattttttccacaggagggaactacacttctggca 300
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 441 attgccccaagctcagagaccccatcaggtcttccacaggagggaactacacttctggca 500
Query: 301 agtaccttagatggggactcagcattctaagagggaagagggaagggtgtctctctcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtaccttagatggggactcagcattctaagagggaagagggaagggtgtctctctcagg 560
Query: 361 aactcatccatattgtcatcaattaaaaaaggaaatttgacaccttcctttttaatagga 420
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 aactcagacatattgtcatcaattaaaaa-ggaaatttgacaccttcctttttaatagga 619
Query: 421 accccatgctacgacattaacagtaatacagggcttccacttgacactgggtccgtgtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 accccatgctacgacattaacagtaatacagggcttccacttgacactgggtccgtgtaa 679
Query: 481 accagtggtgcctactcagtgaagcaggagctccatcctgactctttcgaatgctccgtt 540
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 680 accagtggtgcatactcagtgaagcaggagctccatcctgactctttcgaatgctctgtt 739
Query: 541 cagttcgtgtttgcatctttatcagtctctcccagcatctgcttcaccagatgctgaggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagttcgtgtttgcatctttatcagtctctcccagcatctgcttcaccagatgctgaggg 799
Query: 601 ttgggtagaggtaccacatcctgtctaaagatagtctatattggttctctcatgaatta 659
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttgggtagaggtaccacgtcctgtctaaagatagtctatattggttctctcatgaatta 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1058
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1048
Effective search space: 680152
Effective search space used: 680152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
