Query= MSMg01no066_d14.b1 MSMg01no066_d14.b1 CHROMAT_FILE:
MSMg01no066_d14.b1 PHD_FILE: MSMg01no066_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:57 2005
(337 letters)
>mm_chr13_46715145_46715881
Length = 737
Score = 590 bits (305), Expect = e-173
Identities = 323/329 (98%)
Strand = Plus / Minus
Query: 9 atctgcacagttcacagggaaagtttagttcccgtgtcattacgagatgaggaccgggct 68
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 537 atctgcacagttcacagggaaagtttagttcctgtgtcattacgagatgaggaccaggct 478
Query: 69 tcggtctcccagcagcaggcatctggtttgaggttttttgcttgtggttcttacaaatct 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcggtctcccagcagcaggcatctggtttgaggttttttgcttgtggttcttacaaatct 418
Query: 129 gtctaactgcagggtgggcagatcactggtgcttctcccaggcttgtgccaaaagatcag 188
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtgtaactgcagggtgggcagatcactggtgcttctcccaggcttgtgccaaaagatcaa 358
Query: 189 tttagttagcaaagtgtctctggaccttagcccggaagaaacaacatccgtcaatatgaa 248
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttaattagcaaagtgtctctggaccttagcccggaagaaacaacatccgtcaatatgaa 298
Query: 249 aaagactccggaagacaggaactaactgaaaactcaagtcctttctggtttggactgctg 308
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaagactccggaagaaaggaactaactgaaaactcaagtcctttctggtttggactgctg 238
Query: 309 ctaggtccatgctggcttcaagttgaaga 337
|||||||||||||||||||||||||||||
Sbjct: 237 ctaggtccatgctggcttcaagttgaaga 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_d14.g1 MSMg01no066_d14.g1 CHROMAT_FILE:
MSMg01no066_d14.g1 PHD_FILE: MSMg01no066_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:57 2005
(308 letters)
>mm_chr13_46569946_46570654
Length = 709
Score = 534 bits (276), Expect = e-156
Identities = 297/304 (97%), Gaps = 1/304 (0%)
Strand = Plus / Plus
Query: 6 gaattctcaacaactgcgtatctacctgttgcgac-tgaagtaggagaacatcagaggtg 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 gaattctcaacaactgcgtatctacctgttgcgacatgaagtaggagaacatcagaggtg 265
Query: 65 aggttttagagagccgtttgaggaccctgaaacacatacatttgcttgtgattttttaat 124
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aggttttagagagccgttcaaggaccctgaaacacatacatttgcttgtgattttttaat 325
Query: 125 gtttgaaaagctaggtaagataatatttctttaagaaataatttcattcatctgattaat 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 326 gtttgaaaagctaggtaagataatatttctttaagaaatagtttcattcatctgattaat 385
Query: 185 cttacaaagaacaaccgtatctttccattataggcaaaaatagacaatagacatttcccc 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttacaaagaacaacagtatctttccattataggcaaaaatagacaatagacatttcccc 445
Query: 245 cttcccctgccttgtaaggcatggttcctctagctcactagctgaagatgacattgaatt 304
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 446 cttcccctgccttgtaaggcatggttcctcgagctcactagttgaagatgacattgaatt 505
Query: 305 gcgg 308
||||
Sbjct: 506 gcgg 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 709
Length adjustment: 9
Effective length of query: 299
Effective length of database: 700
Effective search space: 209300
Effective search space used: 209300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
