Query= MSMg01no066_m21.b1 MSMg01no066_m21.b1 CHROMAT_FILE:
MSMg01no066_m21.b1 PHD_FILE: MSMg01no066_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:43 2005
(241 letters)
>mm_chr13_116418667_116419307
Length = 641
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Minus
Query: 1 ctggaataaacttggacaaggcagtacgttaaactatagagcatggtggttgggatttga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ctggaataaacttggacaaggcagtacgttaaactgtagagcatggtggttgggatttga 382
Query: 61 tagttacttttttccatgctagaagctaaatatattaataggtggcacttgggctcacta 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tagttacttttttccatgctagaagctaaatatattaataggtggcacaggggctcacta 322
Query: 121 agttcccttgggtagcctctagaacacccatgtgccttagaagtcctcttttaccttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcccttgggtagcctctagaacacccatgtgccttagaagtcctcttttaccttgag 262
Query: 181 tttagaaacctcctcttttaataatcaactactttgatcttggaatcttctaaacaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagaaacctcctcttttaataatcaactactttgatcttggaatcttctaaacaatta 202
Query: 241 t 241
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_m21.g1 MSMg01no066_m21.g1 CHROMAT_FILE:
MSMg01no066_m21.g1 PHD_FILE: MSMg01no066_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:43 2005
(296 letters)
>mm_chr13_116275168_116275865
Length = 698
Score = 530 bits (274), Expect = e-155
Identities = 292/298 (97%), Gaps = 2/298 (0%)
Strand = Plus / Plus
Query: 1 tgttgtgagtcagtaaagtagatatatttccatggtgagttcaagtggtcacacgagaat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttgtgagtcagtaaagtaaatatatttccatggtgagttcaagtggtcacacgagaat 260
Query: 61 tgtttttatttttatcagtaaaagtgcaaacttatttttttt-ggccatagccatttgta 119
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tatttttatttttatcagtaaaagtgcaaacttatttttttttggccatagccatttgta 320
Query: 120 ttcttaagtttcagtcatggcctgaggctataaggagacttgtatttctctaaatatctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttaagtttcagtcatggcctgaggctataaggagacttgtatttctctaaatatctt 380
Query: 180 ctcttgagctacattaaaacctattatctacgaattgtagtagtaatttgaatttaattt 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctcttgagctacattaaaacctattatctacgaattgcagtagtaatttgaatttaattt 440
Query: 240 attttt-caagcagaataattttatataaacctatcccagtgagttactgaaaattga 296
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 attttttcaagcagaataattttatataaacctatcccagtgggttactgaaaattga 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 698
Length adjustment: 9
Effective length of query: 287
Effective length of database: 689
Effective search space: 197743
Effective search space used: 197743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
