Query= MSMg01no068_n08.b1 MSMg01no068_n08.b1 CHROMAT_FILE:
MSMg01no068_n08.b1 PHD_FILE: MSMg01no068_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:24 2005
(241 letters)
>mm_chr13_95380159_95380799
Length = 641
Score = 420 bits (217), Expect = e-122
Identities = 232/237 (97%)
Strand = Plus / Plus
Query: 5 gaattctgtggaaggggagcaggaggcagctgtgagcctatatatggttctgggaatcga 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattctgtggaaggggagcaggaggcagctgtgagcctatatatggttctgggaatcaa 264
Query: 65 acctgtgtcttctctcacctgttgagctctctgttcagccctgagcactgagttttgtaa 124
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctgtgtcttctcttaactgttgagctctctgttcagccctgagcactgagttttgtaa 324
Query: 125 aaattcctgtgggaaactaaatatttcacagctagagggtctacaggcccttggaaagcc 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 aaattcctgtgggaaactaaatatttcacagctagagggtatacaggcccttggaaagcc 384
Query: 185 attcctggatgctgcacagaatccacgtgctccaggttatgaactctggttaaggtg 241
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attcctggatgctacacagaatccacgtgctccaggttatgaactctggttaaggtg 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_n08.g1 MSMg01no068_n08.g1 CHROMAT_FILE:
MSMg01no068_n08.g1 PHD_FILE: MSMg01no068_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:24 2005
(281 letters)
>mm_chr13_95494552_95495234
Length = 683
Score = 501 bits (259), Expect = e-146
Identities = 277/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 actgtccttttgcacttctctcttgtc-atatttgattttatttgaaac-ccatgtgtca 58
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 314 actgtccttttgcacttctctcttgtcaatatttgattttatttgaaacaccatgtgtca 255
Query: 59 tatttggaagcagcctttgatttattatgtcctgcctcttccaattataaagtgttatta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tatttggaagcagcctttgatttattatgtcctgcctcttccaattataaagtgttatta 195
Query: 119 ttaataaaaattaattatattgcccactttgaggagctcccattaaacactgcctgtgac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttaataaaaattaattatattgcccactttgaggagctcccattaaacactgcctgtgac 135
Query: 179 tggctggggcgtgatttccttctctgtggggaacttaactttctgagcagagtgagagtt 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 134 tggctggggcgtgatttccttctctgtggggaacttaactttctgagcagagagagagtt 75
Query: 239 ttctcactcttataaagccgagacagattcaattctagtgaaa 281
||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 74 ttctcactcagaaaaagccgagacagattcaattctagtgaaa 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 683
Length adjustment: 9
Effective length of query: 272
Effective length of database: 674
Effective search space: 183328
Effective search space used: 183328
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
