Query= MSMg01no068_o17.b1 MSMg01no068_o17.b1 CHROMAT_FILE:
MSMg01no068_o17.b1 PHD_FILE: MSMg01no068_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:30 2005
(323 letters)
>mm_chr13_8394825_8395547
Length = 723
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Plus
Query: 5 gaattctgggtgaacactgggcaggagcttgcaggcatctgttctctgtagcatttcaga 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattctgggtgaacactgggcaggagcttgcaggcatctattctctgtagcatttcaga 264
Query: 65 tacccttaattttcttggcagtgatgggtgataacaggtgagtaatatccccagctatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacccttaattttcttggcagtgatgggtgataacaggtgagtaatatccccagctatgg 324
Query: 125 gagccttatgcccaggagctttcattgcagtcaatgtaaacattgctcttataactgacc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagccttatgcccaggagctttcattgcagtcaatgtaaacattgctcttataactgacc 384
Query: 185 acagctactcacaccgcagcttaccaaaggaagatgggaagccactgtaaagcatacgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagctactcacaccgcagcttaccaaaggaagatgggaagccactgtaaagcatacgat 444
Query: 245 tagaataaactatcctgacgaactagtgccacatgcttctaacttcaagcccagctttcc 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 tagaataaactatcctgacgaactagtgccacatgcttcaaacttcaagcccagctttcc 504
Query: 305 ctagatttggctattata 322
||||||||||||||||||
Sbjct: 505 ctagatttggctattata 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_o17.g1 MSMg01no068_o17.g1 CHROMAT_FILE:
MSMg01no068_o17.g1 PHD_FILE: MSMg01no068_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:31 2005
(248 letters)
>mm_chr13_8533081_8533727
Length = 647
Score = 441 bits (228), Expect = e-128
Identities = 243/248 (97%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1 tgatttcattatttcaacttaggcaaaaaactgagtttaatggacaagagagtcaccgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgatttcattatttcaacttaggcaaaaaactgagtttaatggacaagagagtcaccgaa 388
Query: 61 tgatgttttaatatttcccatgactactgcctgagatatctgtttagttataccctagag 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgatgttttaatatttcccacgactactgcctgagatatctgtttagttataccctagag 328
Query: 121 taagtaccctggctgccattgctcctagtattgtgctagaacagggacatcagaatatat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 327 taagtaccctggctgccattgctcctagtattgtgctagaacagggacgtcagaacatat 268
Query: 181 ttttatagggtttcaataatctacaattctggtgtcagacatgagggctgtggtagaggt 240
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 267 ttt-atagggtttcaataatctacaattctggtgtcagacatgggggctgtggtagaggt 209
Query: 241 tctaagag 248
||||||||
Sbjct: 208 tctaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
