Query= MSMg01no072_k03.b1 MSMg01no072_k03.b1 CHROMAT_FILE:
MSMg01no072_k03.b1 PHD_FILE: MSMg01no072_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(497 letters)
>mm_chr13_101965811_101966707
Length = 897
Score = 814 bits (421), Expect = 0.0
Identities = 433/439 (98%), Gaps = 4/439 (0%)
Strand = Plus / Minus
Query: 1 tttgaagaaaattaattcagagaatgaacaacagttgaccagccattctggacagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttgaagaaaattaattcagagaatgaacaacagttgaccagccattctggacagagaag 376
Query: 61 agaagacaataaggaagaagaagtcatgacaagactatcagacctgaagagtcaggaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agaagacaataaggaagaagaagtcatgacaagactatcagacctgaagagtcaggaaca 316
Query: 121 tggcgcttccgccgaagactccattccaaccagacaggcggttgatgaaccaagttccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tggcgcttccgccgaagactccattccaaccagacaggcggttgatgaaccaagttccct 256
Query: 181 atccttaaatgaaagaggcagaatcgtctcttaataagcatctcctttctcaaacatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atccttaaatgaaagaggcagaatcgtctcttaataagcatctcctttctcaaacatttt 196
Query: 241 ttaagatatttaattaaactttttttttttttttttaggattatggcttgttacgagatt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 195 ttaagatatttaattaaac----tttttttttttttaggattatggcttgttacaagatt 140
Query: 301 ctaaattagtgtaaacagaaacataacgcagactaacttaagggctggctacaggagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctaaattagtgtaaacagaaacataacgcagactaacttaagggctggctacaggagaaa 80
Query: 361 atggtaaagccacgtgacaagctgatgtggcttttggatcatcctggaacctgacttaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggtaaagccacgtgacaagctgatgtggcttttggatcatcctggaacctgacttaca 20
Query: 421 caacagtgctgtctatttc 439
|| ||||||||||||||||
Sbjct: 19 catcagtgctgtctatttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_k03.g1 MSMg01no072_k03.g1 CHROMAT_FILE:
MSMg01no072_k03.g1 PHD_FILE: MSMg01no072_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(325 letters)
>mm_chr13_101795129_101795853
Length = 725
Score = 547 bits (283), Expect = e-160
Identities = 313/327 (95%), Gaps = 9/327 (2%)
Strand = Plus / Plus
Query: 1 agttcagtcctcaggtggcaggagtggggtcatggcagacataaggactgtgcattgact 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 208 agttcagtcctcaggtggcaggagtggggtcatggcag------gg-ctgtgcattgatt 260
Query: 61 gcggcttaagtatctaactcaagcattagagagctaggagacttaaaaattttatttact 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gcggcttaagtatctaactcaagcattagagagctaggagacttaaaaaaattatttact 320
Query: 121 tttatttcatttgcattggcgttttacctgcatgcatgtttgtatgagtgtgtcagatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatttcatttgcattggcgttttacctgcatgcatgtttgtatgagtgtgtcagatct 380
Query: 181 cctggaagtggagttacagacctgagagaaaaaaaggtttattttgtgtgtgtgt--aca 238
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct: 381 cctggaagtggagttacagacctaagagaaaaaaaggtttattatgtgtgtgtgtgcaca 440
Query: 239 agtgtgggtgggttgtatgtatgggtggagaccatatgtcgactttggatgtttctcctc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgtgggtgggttgtatgtatgggtggagaccatatgtcgactttggatgtttctcctc 500
Query: 299 aacaactgtacagcttgtcttttgagg 325
|||||||||||||||||||||||||||
Sbjct: 501 aacaactgtacagcttgtcttttgagg 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
