Query= MSMg01no075_p18.b1 MSMg01no075_p18.b1 CHROMAT_FILE:
MSMg01no075_p18.b1 PHD_FILE: MSMg01no075_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:48 2005
(621 letters)
>mm_chr13_69850543_69851563
Length = 1021
Score = 1180 bits (610), Expect = 0.0
Identities = 616/618 (99%), Gaps = 1/618 (0%)
Strand = Plus / Plus
Query: 5 gaattcttattcccc-cagtggcttcttgtgccaggtatcctaccacagagacaagaaaa 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttattccccaaagtggcttcttgtgccaggtatcctaccacagagacaagaaaa 263
Query: 64 gtttaaccagggctgtcgagatggctcagcgggtaagagcactgactgctcttttgaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttaaccagggctgtcgagatggctcagcgggtaagagcactgactgctcttttgaagg 323
Query: 124 tcctgagttcaattcccagcaatcacatggtggctcacaaccacccgtaatgagaactga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcctgagttcaattcccagcaatcacatggtggctcacaaccacccgtaatgagaactga 383
Query: 184 tgccctcgtctggcacgtctgaagacagctacagtgtaatcatgtataataataaataaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgccctcgtctggcacgtctgaagacagctacagtgtaatcatgtataataataaataaa 443
Query: 244 tctttgggcctgagagagcggagttgaccggagtgagtggggctgaccggagtgagcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctttgggcctgagagagcggagttgaccggagtgagtggggctgaccggagtgagcagg 503
Query: 304 gttgactagagggagcagaggtcctaaaaattcaattcccaacaaacacatgaagtctca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttgactagagggagcagaggtcctaaaaattcaattcccaacaaacacatgaagtctca 563
Query: 364 cagtcatctatctgttcagccacagtgcacctctatacataaaataaataaataaatctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagtcatctatctgttcagccacagtgcacctctatacataaaataaataaataaatctt 623
Query: 424 taaaaaaaagtttaactaatgcagatggctatttggttacaacgcatcaaaacttgagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaaaaaaagtttaactaatgcagatggctatttggttacaacgcatcaaaacttgagaa 683
Query: 484 ctctcctgcttttattgttttaatagctgctgcatttgagaaaatgtttctttaacagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctctcctgcttttattgttttaatagctgctgcatttgagaaaatgtttctttaacagaa 743
Query: 544 ggctcagtatatccatgaaggagccctaagggggcagcctagagttcccaagggctggaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggctcagtatatccatgaaggagccctaagggggcagcctagagttcccaagggctggaa 803
Query: 604 aagtaactgtcatttgaa 621
||||||||||||||||||
Sbjct: 804 aagtaactgtcatttgaa 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_p18.g1 MSMg01no075_p18.g1 CHROMAT_FILE:
MSMg01no075_p18.g1 PHD_FILE: MSMg01no075_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:48 2005
(590 letters)
>mm_chr13_69952901_69953890
Length = 990
Score = 1141 bits (590), Expect = 0.0
Identities = 590/590 (100%)
Strand = Plus / Minus
Query: 1 ctcagtccaagctgacaggggaaatgatgcaggggctcagggttatcctgaccaacccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ctcagtccaagctgacaggggaaatgatgcaggggctcagggttatcctgaccaacccca 731
Query: 61 ctctgcagcacatgatctgacagagccccttgctcactccagctgcaggctctctgggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ctctgcagcacatgatctgacagagccccttgctcactccagctgcaggctctctgggct 671
Query: 121 gcctgcacacagcagacacacccagcacgtgtaggccaggctggcatcaggcaagtggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gcctgcacacagcagacacacccagcacgtgtaggccaggctggcatcaggcaagtggcg 611
Query: 181 agcagcacaggtagagcaagcaatgctggagtgaggctggcagggcagtggacagtgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agcagcacaggtagagcaagcaatgctggagtgaggctggcagggcagtggacagtgggt 551
Query: 241 ggagagaaagttacggacaccccaaccagcaccctgcacaaggaactcttgttgaggaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggagagaaagttacggacaccccaaccagcaccctgcacaaggaactcttgttgaggaag 491
Query: 301 gccaggctgagctgtcacaggaagcaaagctggctgagctgaggaggaggctcactgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gccaggctgagctgtcacaggaagcaaagctggctgagctgaggaggaggctcactgtgc 431
Query: 361 aaaaggaacatgaattccaggccgaggagaacaacccaaaacagggcctggtggctaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaaaggaacatgaattccaggccgaggagaacaacccaaaacagggcctggtggctaacg 371
Query: 421 gggagccaggaaacaagggcacacagtgctgtccctgtaaccacacacagagcacccatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gggagccaggaaacaagggcacacagtgctgtccctgtaaccacacacagagcacccatc 311
Query: 481 tgaaaagcaagcaccgtcagtgacctcagtgagaaaactgtagtccatgtcaagacacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgaaaagcaagcaccgtcagtgacctcagtgagaaaactgtagtccatgtcaagacacag 251
Query: 541 ctccctagagcagccaagttctctgtgtgccgtgtcacagtgtaaagaac 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctccctagagcagccaagttctctgtgtgccgtgtcacagtgtaaagaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
