Query= MSMg01no076_d21.b1 MSMg01no076_d21.b1 CHROMAT_FILE:
MSMg01no076_d21.b1 PHD_FILE: MSMg01no076_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:09 2005
(431 letters)
>mm_chr13_25846632_25847466
Length = 835
Score = 779 bits (403), Expect = 0.0
Identities = 427/435 (98%), Gaps = 4/435 (0%)
Strand = Plus / Plus
Query: 1 ggcctgccagaaactcagcatacagcagaccagaaaaagcagtatttcctgtcttaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcctgccagaaactcagcatacagcagaccagaaaaagcagtatttcctgtcttaccac 260
Query: 61 a-ccactgaaaacacacagtggtgtgttcttatttctttagtatgacctttttgtttata 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccactgaaaacacacagtggtgtgttcttatttctttagtatgacctttttgtttata 320
Query: 120 gataacgaaagagtaaggattggggagccattattttagaaattgcaatccctgtcggaa 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gataaagaaagagtaaggattggggagccattattttagaaattgcaatccctgtgggaa 380
Query: 180 aaaatggaatagcttaaaacacctgtggtagaaagctacatgccttgct-c-t-cctggg 236
|||||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||
Sbjct: 381 aaaatggaatagcttaaaacacctttggtagaaagctacatgccttgctacatgcctggg 440
Query: 237 cttaaacctgggcatacttttgtttaggagactaaaaatataaaatcattgagttaattt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttaaacctgggcatacttttgtttaggagactaaaaatataaaatcattgagttaattt 500
Query: 297 aaattaaaacatgagatgtaagaggctgctgagttttcggagcctatctgattaaccaac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattaaaacatgagatgtaagaggctgctgagttttcggagcctatctgattaaccaac 560
Query: 357 ctattatgatgtgggtttggtaaaagattagcaaagctgcgcctacttaaaagattaacc 416
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ctattatgatgtgggtttggtaaaagattagcaaagctgcgtctacttaaaagattaacc 620
Query: 417 tcctagccaactgcc 431
|||||||||||||||
Sbjct: 621 tcctagccaactgcc 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 835
Length adjustment: 9
Effective length of query: 422
Effective length of database: 826
Effective search space: 348572
Effective search space used: 348572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_d21.g1 MSMg01no076_d21.g1 CHROMAT_FILE:
MSMg01no076_d21.g1 PHD_FILE: MSMg01no076_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:09 2005
(369 letters)
>mm_chr13_25956522_25957290
Length = 769
Score = 667 bits (345), Expect = 0.0
Identities = 363/369 (98%)
Strand = Plus / Minus
Query: 1 ctggctttgagttttgctctcattttcccacatggccttggctttagcgtgcaactcagc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 569 ctggctttgagttttgctctcattttcccacatggccttggctttagcatgcaactcagc 510
Query: 61 atgaatttttagatcagttcaagaaaggagcttaaatatgtcaaaatgtctactatcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atgaatttttagatcagttcaagaaaggagcttaaatatgtcaaaatgtctactatcctc 450
Query: 121 tgattgatgtccaattaggaaatctagtttggagagattgacctcaccctaaggctcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgattgatgtccaattaggaaatctagtttggagagattgacctcaccctaaggctcctt 390
Query: 181 aatgtcacatatactctgtgtcccattgatcaatcttattttgaaaactcaatcacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aatgtcacatatactctgtgtcccattgatcaatcttattttgaaaactcaatcacatga 330
Query: 241 ctctaaatatttatttgagaatagcagagatgctcaggcaatggtcctgcctgtgtgtgc 300
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 329 ctctaaatatttaagtgagaatagcagagatgctcaggcaatggtcttgcctgtgtgtgt 270
Query: 301 acacagactcctgagtcagaaccacttgcctggaaaataaccagaagtacctggaagtcc 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 acacagactcctgagtcagaaccacttgcctgcaaaataaccagaagtacctggaagtcc 210
Query: 361 atttaatta 369
|||||||||
Sbjct: 209 atttaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
