Query= MSMg01no076_e06.b1 MSMg01no076_e06.b1 CHROMAT_FILE:
MSMg01no076_e06.b1 PHD_FILE: MSMg01no076_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:10 2005
(634 letters)
>mm_chr13_20877250_20878283
Length = 1034
Score = 1201 bits (621), Expect = 0.0
Identities = 624/625 (99%)
Strand = Plus / Plus
Query: 9 ggaattcaatcacacagcaggctcccttgcaggcacagaccagcaggccctctccttttt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattcaatcacacagcaggctcccttgcaggcacagaccagcaggccctctccttttt 268
Query: 69 cctgtcacctcagagtccatatgatctctgaaacagacagacttcacacacaaaagtctg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cctgtcacctcagagtccatatgatctctgaaacagacagacttcacacacaaaagtctg 328
Query: 129 gaatccaaatccccaagtcagggcttttacttctcagaaagatgaggcctaggcattttg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaatccaaatccccaagtcagggcttttacttctcagaaagatgaggcctaggcattttg 388
Query: 189 gctgcaggcctgtacagatttggagaaaaacaaattcttaataggaacactcatggtgac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctgcaggcctgtacagatttggagaaaaacaaattcttaataggaacactcatggtgac 448
Query: 249 agattctgtcctttaccaaggctctggaaccccatctcacacctccaccatggcctaaag 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agattctgtcctttaccaaggctctggaaccccatctcacacctccaccatggcctaaag 508
Query: 309 gctagaggcaatggtggtgtagattctgccagctcaaagcttcatccccagggctacctt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gctagaggcaatggtggtgtagattctgccagctcaaagcttcatccccagggctacctt 568
Query: 369 aactaactactccctcgttcccttcagtaagtaccagcctaggaagaattaaggctgcct 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aactaactactccctcgttcccttcagtaagtaccagcctaggaagaattaaggctgcct 628
Query: 429 ggagaacttgtcttgtttcagcggtacctgaagtcacatctcctgccttccagtgtctgc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggagaacttgtcttgtttcagcggtacctgaagtcacatctcctgccttccagtgtctgc 688
Query: 489 agccgagcagaagactttggaaagtgccagttagcagagcagatggacaccacgtggact 548
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 689 agccgagcagaagactttggaaagtgccagttagcagagcagatggacgccacgtggact 748
Query: 549 ggactcctgtccctgtggtaatttttcacttccctgactctgtcagccctcatcttcatc 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggactcctgtccctgtggtaatttttcacttccctgactctgtcagccctcatcttcatc 808
Query: 609 ctctgactctccttactctcttttt 633
|||||||||||||||||||||||||
Sbjct: 809 ctctgactctccttactctcttttt 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_e06.g1 MSMg01no076_e06.g1 CHROMAT_FILE:
MSMg01no076_e06.g1 PHD_FILE: MSMg01no076_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:10 2005
(249 letters)
>mm_chr13_21035948_21036596
Length = 649
Score = 460 bits (238), Expect = e-134
Identities = 247/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 ttcctctgctacagcttggatgccacttcatcctcctactaagcttggcctggccataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcctctgctacagcttggatgccacttcatcctcctactaagcttggcctggccataaa 260
Query: 61 aatacaatttttgccttgcaatatcttggctttagatcatgatttttgacactattacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aatacaatttttgccttgcaatatcttggctttagatcatgatttttgacactattacat 200
Query: 121 tcatcacaacctaggctgaccactcaaaccctggttt-agggagaggcagcctgtgtata 179
|||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 199 tcatcataacctaggctgaccactcaaaccctggtttga-ggagaggcagcctgtgtata 141
Query: 180 caaataaaataacttgctttaattggttgaccatgatgatttgggttggtggtcttctct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 caaataaaataacttgctttaattggttgaccatgatgatttgggttggtggtcttctct 81
Query: 240 aatctttggg 249
||||||||||
Sbjct: 80 aatctttggg 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
