Query= MSMg01no076_j22.b1 MSMg01no076_j22.b1 CHROMAT_FILE:
MSMg01no076_j22.b1 PHD_FILE: MSMg01no076_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:39 2005
(354 letters)
>mm_chr13_38821213_38821967
Length = 755
Score = 586 bits (303), Expect = e-172
Identities = 339/351 (96%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 5 gaattctcggggtgtgccctcaagatagacacatctataccacatttattaataccatag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaattctcggggtgtgaattcaagatagacacatctataccacatttattaataccatag 496
Query: 65 tataaagagcatctcatctctttatg-aatatctatctctcttttgggagatttcctagg 123
||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 495 tataaagagcatctcatctctctatgaaatatctatctctcttttgggagatttactagg 436
Query: 124 gaaaagtcatgtatgaaagttggttataattgaatcaaggttatggccagaccaggcaac 183
|||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 435 gaaaagccatgtgtgagagttggttataattgaatcaaggttatggccaggccaggtaac 376
Query: 184 aagctcatgtgactatgtgtagctgtgagtctgaggacaggggcttgcaataacaaaata 243
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 375 aagctcatgtgactatgtgtagctgtgagtctgagtacaggggcttgcaataacaaaata 316
Query: 244 cccgaggccaatcaagttataaggaagagtctggtttggcctataattatacacaaaatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cccgaggccaatcaagttataaggaagagtctggtttggcctataattatacacaaaatt 256
Query: 304 gggcagctacaccttggtagtcagctcatgatagtgaaggagaaagaagta 354
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gggcagctacaccttggtagtcagctcatgatagtgaaggagaaagaagta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 755
Length adjustment: 9
Effective length of query: 345
Effective length of database: 746
Effective search space: 257370
Effective search space used: 257370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_j22.g1 MSMg01no076_j22.g1 CHROMAT_FILE:
MSMg01no076_j22.g1 PHD_FILE: MSMg01no076_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:39 2005
(430 letters)
>mm_chr13_38689347_38690176
Length = 830
Score = 824 bits (426), Expect = 0.0
Identities = 429/430 (99%)
Strand = Plus / Plus
Query: 1 tctctctctctctaactaactaaagggtaaagcttcatgaatctgaaagagagtaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctctctctaactaactaaagggtaaagcttcatgaatctgaaagagagtaagaag 260
Query: 61 ggatacatgggaggaagaaaataaaagggagaaatgatgggattatactttctaaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatacatgggaggaagaaaataaaagggagaaatgatgggattatactttctaaaaatt 320
Query: 121 acttaaaaatgaaaaaatgttttaaatatctaagcattgttctctaatttaataatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttaaaaatgaaaaaatgttttaaatatctaagcattgttctctaatttaataatttat 380
Query: 181 ttgatgtacattgaagttttaaactttactataccacagaagacaccatgtaaacagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgatgtacattgaagttttaaactttactataccacagaagacaccatgtaaacagagt 440
Query: 241 ggaggatttctaaattttacagtgatctcactgtaactacatgaaccactgtctttcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaggatttctaaattttacagtgatctcactgtaactacatgaaccactgtctttcaaa 500
Query: 301 gtgcattcctctgagctggagagatggttccatggttaagagcactggctgctcttccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgcattcctctgagctggagagatggttccatggttaagagcactggctgctcttccag 560
Query: 361 aggacccaggttcaattcccagcacccacatggtagctcacagctgtctgtaacttcagt 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 aggacccaggttcaattcccagcacccacatggcagctcacagctgtctgtaacttcagt 620
Query: 421 tccaggggat 430
||||||||||
Sbjct: 621 tccaggggat 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
