CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAA
TTCATTAATGGCTACACAGGTTCTTATTGTTTTATTTAATAAAACTTTTG
TCTCTTGTGATGTATGCGATCTAACCATCCCTGTTTCCCTCCTCCTACTT
CTTCCACATGCCCCTCAACAAATCCCCCTGCTCTCTCTATGCCTTACTAT
CTGAGATCCCTGTAGGTGAATGGGTCAGTGGGTTAAGATTCAGACCCTTC
AATCAAGGACACTCATCTCTGAGTTCCCTAAGCATATCACGTTGGCCTTG
GTCTATCCGCCCATGCAAAGTGTGTTTCAATGGCTCTCCTGGTTGAAGCT
GGCTGTCCCTTTACATCCATGCCTAGTATGGATGGGTTTTCCCGCTCCCT
GCATCTGAGGAAACACATAATCTTGCTTTGGATTTTGCCTTGGTAACCGG
CACAAGGCATTCTTTGAGATGCTACTTGGTGTTTGGGGCTCCGTTAGGCT
CTTGTGGGAACAGGGCACATTTCTAGGCAAAGAAGGGGAAGAGGACTTTG
GTTGCTGTTGTTGTAGTTTTGTCTGTTTGTTTGTTCACTCAAGCTGGTAG
TTTCTAGCACAAGATTTATACACAGGCCTATGACATAGCATTGTTTGTGT
TCAAACCTGATTAACACTGATTCTAGTAGAAAA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTTGGCTCCCTTACTGAAAACCAT
TTGACTGTGTATGTGAGTTGATTTCTGGGGTCCCTTCCATCAGTGTGGAA
CAGCCCCACCCTGGGCCATCACCACAGTTCTAGTATAAGTTCTGGGTTGA
CAAAGTGGCAACTCCTCCACCTTTGTCCATTCCTAAGTAGGTTTGGATAT
CCAGGGTCTCATGAGATTTCTTACAGATTTTTAAATGTTTTTCTAGTTCT
GCAAAAATATTTGTGGAACATTGATAGGGAATCCATAGAATCTATAATTA
GGGCTTTTAATAGGTTAAGACTTTATTAATGCTAAGCCTTCTATGGCCAC
AGAGTCTGCCCAGCTGTATATCCTTTGATTTATTTCAGTAATGTTGTGGG
AATTTTAACGTACAACATACAGGTCCTTTGTCTGGTCAGAAGTTCCACCT
GTGCATTCTGGTTGGGAATGATTATACATTGGGTTGCTTATGTAACTCGC
TTTTGCTGGTTCCTTGTACGTGCATAGAATTAGCATTGATGCTTGTGTGT
GGTCTTTGCTACCCCTTTCAACTTTATCACAAGATTTACTGTCCGTAACG
TTTTCTCCTTGAGATGCCTTTATGATTTTTGCACA

Query= MSMg01no078_f14.b1 MSMg01no078_f14.b1 CHROMAT_FILE:
MSMg01no078_f14.b1 PHD_FILE: MSMg01no078_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:39 2005
         (546 letters)



>mm_chr13_57600383_57601329
          Length = 947

 Score =  996 bits (515), Expect = 0.0
 Identities = 533/539 (98%), Gaps = 1/539 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   ttcattaatgg-ctacacaggttcttattgttttatttaataaaacttttgtctcttgtg 67
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcattaatggaatacacaggttcttattgttttatttaataaaacttttgtctcttgtg 688

                                                                       
Query: 68  atgtatgcgatctaaccatccctgtttccctcctcctacttcttccacatgcccctcaac 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 atgtatgcgatctaaccatccctgtttccctcctcctacttcttccacatgcccctcaac 628

                                                                       
Query: 128 aaatccccctgctctctctatgccttactatctgagatccctgtaggtgaatgggtcagt 187
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 627 aaatccccctgctctctctatgccttactatctgagatccctgtaggtgaatgggtcaat 568

                                                                       
Query: 188 gggttaagattcagacccttcaatcaaggacactcatctctgagttccctaagcatatca 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gggttaagattcagacccttcaatcaaggacactcatctctgagttccctaagcatatca 508

                                                                       
Query: 248 cgttggccttggtctatccgcccatgcaaagtgtgtttcaatggctctcctggttgaagc 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cgttggccttggtctatccgcccatgcaaagtgtgtttcaatggctctcctggttgaagc 448

                                                                       
Query: 308 tggctgtccctttacatccatgcctagtatggatgggttttcccgctccctgcatctgag 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tggctgtccctttacatccatgcctagtatggatgggttttcccgctccctgcatctgag 388

                                                                       
Query: 368 gaaacacataatcttgctttggattttgccttggtaaccggcacaaggcattctttgaga 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaaacacataatcttgctttggattttgccttggtaaccggcacaaggcattctttgaga 328

                                                                       
Query: 428 tgctacttggtgtttggggctccgttaggctcttgtgggaacagggcacatttctaggca 487
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 327 tgctacttggtgtttggggctccgttaagctcttgtgggaacagggcacatttctaggca 268

                                                                      
Query: 488 aagaaggggaagaggactttggttgctgttgttgtagttttgtctgtttgtttgttcac 546
           |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 267 aagaaggggaagaggattttggttgctgttgttgtagttttgtctgttggtttgttcac 209


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space:   502232
Effective search space used:   502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)