Query= MSMg01no079_a07.b1 MSMg01no079_a07.b1 CHROMAT_FILE:
MSMg01no079_a07.b1 PHD_FILE: MSMg01no079_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:31 2005
(618 letters)
>mm_chr13_38820950_38821967
Length = 1018
Score = 1094 bits (566), Expect = 0.0
Identities = 602/614 (98%)
Strand = Plus / Minus
Query: 5 gaattctcggggcgtgcattcaagatagacacatctataccacatttattaataccatag 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gaattctcggggtgtgaattcaagatagacacatctataccacatttattaataccatag 759
Query: 65 tataaagagcatctcatctctttatgaaatatctatctctcttttgggagatttcctagg 124
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 758 tataaagagcatctcatctctctatgaaatatctatctctcttttgggagatttactagg 699
Query: 125 gaaaagtcatgtatgaaagttggttataattgaatcaaggttatggccagaccaggcaac 184
|||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 698 gaaaagccatgtgtgagagttggttataattgaatcaaggttatggccaggccaggtaac 639
Query: 185 aagctcatgtgactatgtgtagctgtgagtctgaggacaggggcttgcaataacaaaata 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 638 aagctcatgtgactatgtgtagctgtgagtctgagtacaggggcttgcaataacaaaata 579
Query: 245 cccgaggccaatcaagttataaggaagagtctggtttggcctataattatacacaaaatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cccgaggccaatcaagttataaggaagagtctggtttggcctataattatacacaaaatt 519
Query: 305 gggcagctacaccttggtagtcagctcatgatagtgaaggagaaagaagtaagtaagtgg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 518 gggcagctacaccttggtagtcagctcatgatagtgaaggagaaagaagtaagtgagtgg 459
Query: 365 aaggaacatgtgtgtaagagtcacagaagggaaatgtgccgcctttataacaactaagtc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaggaacatgtgtgtaagagtcacagaagggaaatgtgccgcctttataacaactaagtc 399
Query: 425 tcaaggaacccactcccactaactctcattcttacaaagcctaatattcactcaagggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcaaggaacccactcccactaactctcattcttacaaagcctaatattcactcaagggaa 339
Query: 485 caaacccaggtgcatcaagaatgccagcaattcattcatgaggatgctgccacaagatga 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctaacccaggtgcatcaagaatgccagcaattcattcatgaggatgctgccacaagatga 279
Query: 545 gatcacatctcctgacaccctcttcttcaagactccactacttctcaatgtccttcctct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gatcacatctcctgacaccctcttcttcaagactccactacttctcaatgtccttcctct 219
Query: 605 gagggcccaacttc 618
||||||||||||||
Sbjct: 218 gagggcccaacttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_a07.g1 MSMg01no079_a07.g1 CHROMAT_FILE:
MSMg01no079_a07.g1 PHD_FILE: MSMg01no079_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:31 2005
(526 letters)
>mm_chr13_38689347_38690272
Length = 926
Score = 1011 bits (523), Expect = 0.0
Identities = 526/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 tctctctctctctaactaactaaagggtaaagcttcatgaatctgaaagagagtaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctctctctaactaactaaagggtaaagcttcatgaatctgaaagagagtaagaag 260
Query: 61 ggatacatgggaggaagaaaataaaagggagaaatgatgggattatactttctaaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatacatgggaggaagaaaataaaagggagaaatgatgggattatactttctaaaaatt 320
Query: 121 acttaaaaatgaaaaaatgttttaaatatctaagcattgttctctaatttaataatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttaaaaatgaaaaaatgttttaaatatctaagcattgttctctaatttaataatttat 380
Query: 181 ttgatgtacattgaagttttaaactttactataccacagaagacaccatgtaaacagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgatgtacattgaagttttaaactttactataccacagaagacaccatgtaaacagagt 440
Query: 241 ggaggatttctaaattttacagtgatctcactgtaactacatgaaccactgtctttcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaggatttctaaattttacagtgatctcactgtaactacatgaaccactgtctttcaaa 500
Query: 301 gtgcattcctctgagctggagagatggttccatggttaagagcactggctgctcttccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgcattcctctgagctggagagatggttccatggttaagagcactggctgctcttccag 560
Query: 361 aggacccaggttcaattcccagcacccacatggcagctcacagctgtctgtaacttcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggacccaggttcaattcccagcacccacatggcagctcacagctgtctgtaacttcagt 620
Query: 421 tccaggggatctggcaccctcaaacagatgtacatgcagacaaacatcagggcacataca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccaggggatctggcaccctcaaacagatgtacatgcagacaaacatcagggcacataca 680
Query: 481 aataaataaatctttttttttaaa-ctacttaggcacttctgatggc 526
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 aataaataaatctttttttttaaaactacttaggcacttctgatggc 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
