Query= MSMg01no079_e14.b1 MSMg01no079_e14.b1 CHROMAT_FILE:
MSMg01no079_e14.b1 PHD_FILE: MSMg01no079_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:52 2005
(334 letters)
>mm_chr13_5560994_5561727
Length = 734
Score = 607 bits (314), Expect = e-178
Identities = 329/334 (98%)
Strand = Plus / Plus
Query: 1 cagagaagtagctccacagagataagcagaaagattttatacagatttgtctcatggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagaagtagctccacagagataagcagaaagattttatacagatttgtctcatggaat 260
Query: 61 tctgaaagctgagaggtttcaaatgatgcaattagacaggaggaaacccgagacagcaat 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tctgaaagctgagaggtttcaaatgatgcaattagacaggaggaagcccgagacagcaat 320
Query: 121 agtcttatcctagtctaggttaaaggccctagaataagagtcactggtaatttaatttct 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agtcttatcctagtctaggttaaaggccctagaataagaatcactggtaatttaatttct 380
Query: 181 tgtccactggcctcagccttgagaacagatgtttcagtctgagtccaaaagcaaaaagtg 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tgtccactggcctcagccttgagaacagatgcttcagtctgagtccaaaagcaaaaagtg 440
Query: 241 agcagtgttctaggtgatgtaatcatgcaattggagttcctcttatttggtaaagattgc 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 agcagtgttctaggtgatgtaatcatacaattggagttcctcttatttggtaaagattgc 500
Query: 301 tattttgttttattcaggcctgtatttgttcaga 334
|||||||||||||||||||||||| |||||||||
Sbjct: 501 tattttgttttattcaggcctgtaattgttcaga 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_e14.g1 MSMg01no079_e14.g1 CHROMAT_FILE:
MSMg01no079_e14.g1 PHD_FILE: MSMg01no079_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:52 2005
(320 letters)
>mm_chr13_5704177_5704896
Length = 720
Score = 619 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 1 attgttgaatgtttgcttggactaatctgttgatgatttcacttatccaagcactctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attgttgaatgtttgcttggactaatctgttgatgatttcacttatccaagcactctgag 461
Query: 61 gtggtagagcacagttatgggaaatgggtcactggaaggatacctttgaagggtcaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gtggtagagcacagttatgggaaatgggtcactggaaggatacctttgaagggtcaatat 401
Query: 121 tgtatctgacttctttctgtctctttgtatcctgtctgccctttgtgtcaccctgatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgtatctgacttctttctgtctctttgtatcctgtctgccctttgtgtcaccctgatgtc 341
Query: 181 ctgtctcactgagtagaggttcatgtacaatgaggccagatgattatgcagatgactatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ctgtctcactgagtagaggttcatgtacaatgaggccagatgattatgcagatgactatg 281
Query: 241 aactaaaatctatgaggtagtaagccaaaataattctctttcactttctctttcctccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aactaaaatctatgaggtagtaagccaaaataattctctttcactttctctttcctccag 221
Query: 301 gtctattgctgagtagagtc 320
||||||||||||||||||||
Sbjct: 220 gtctattgctgagtagagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
