Query= MSMg01no079_g02.b1 MSMg01no079_g02.b1 CHROMAT_FILE:
MSMg01no079_g02.b1 PHD_FILE: MSMg01no079_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:00 2005
(619 letters)
>mm_chr13_43752379_43753397
Length = 1019
Score = 1168 bits (604), Expect = 0.0
Identities = 613/616 (99%)
Strand = Plus / Minus
Query: 4 ggaattcccacggttctgctctgaaggttaagactcctcccgagatgacagaagtccgga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ggaattcccacggttctgctctgaaggttaagactcctcccgagatgacagaagtccgga 760
Query: 64 tacaagagagcacttgtaagacagagataaaggtggtcatactgcttactattccagggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tacaagagagcacttgtaagacagagataaaggtggtcatactgcttactattccagggc 700
Query: 124 tctgttctgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tctgttctgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattct 640
Query: 184 gtttcttcagactatctcagggacagatttcatgtagtccgagtcatgctcacaaaggcc 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 639 gtttcttcagactatctcagggacaggtttcatgtagtccgagtcatgctcacaaaggcc 580
Query: 244 gtcaactgttagaacttggcattagtgggataggttaccattttccctgtatggaaccac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gtcaactgttagaacttggcattagtgggataggttaccattttccctgtatggaaccac 520
Query: 304 aactactaagtgtcaccttcatttcctggatactcctcccatcccagcgaataaatataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aactactaagtgtcaccttcatttcctggatactcctcccatcccagcgaataaatataa 460
Query: 364 tcatcactgccgggagatgatgggatgatatgtctcacatggatgcaagtgtcgtggtca 423
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcagcactgccgggagatgatgggatgatatgtctcacatggatgcaagtgtcgtggtca 400
Query: 424 ttatctgtggctactgctactggtgatggtgccaaaggcttgctcctcttcatgatggtg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttatctgtggctactgctactggtgatggtgccaaaggcttgctcctcttcatgatggtg 340
Query: 484 acagtgccaaaagtttccttctctccatggtggcaacagtgctgaagacttgttcctctc 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acagtgccaaaagtgtccttctctccatggtggcaacagtgctgaagacttgttcctctc 280
Query: 544 cagtttcttttgtaccaaatggagcatcactcactcttcaaacgtcttcctttccggacc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cagtttcttttgtaccaaatggagcatcactcactcttcaaacgtcttcctttccggacc 220
Query: 604 atcagctttcatgaca 619
||||||||||||||||
Sbjct: 219 atcagctttcatgaca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_g02.g1 MSMg01no079_g02.g1 CHROMAT_FILE:
MSMg01no079_g02.g1 PHD_FILE: MSMg01no079_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:00 2005
(481 letters)
>mm_chr13_43581711_43582592
Length = 882
Score = 901 bits (466), Expect = 0.0
Identities = 478/482 (99%), Gaps = 1/482 (0%)
Strand = Plus / Plus
Query: 1 ccccttaattttttctttcc-aactcctgtggcttttctcttacttggcaaaggtcatgc 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccttaattttttctttccaaactcctgtggcttttctcttacttggcaaaggtcatgc 260
Query: 60 cctcttttccacacagatgtctcccgtttttattgctgctaactgacatgcggaaagcat 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcttttccgcacagatgtctcccgtttttattgctgctaactgacatgcggaaagcat 320
Query: 120 tcaaaatggagcagccacggaaaacaagacagcaagagctcatgtcctccctctgtgctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaatggagcagccacggaaaacaagacagcaagagctcatgtcctccctctgtgctt 380
Query: 180 ctgtatcaaaggtcaagttcacgatgaaatggtagacagggaaggctgacccagaaagtc 239
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ctggatcaaaggtcaagttcacgatgaaatggtagatagggaaggctgacccagaaagtc 440
Query: 240 tgagccccagggaaaggctcctgccatccttggaggggctgctatagttaagcccgatgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagccccagggaaaggctcctgccatccttggaggggctgctatagttaagcccgatgc 500
Query: 300 tctcgtactcgggcagccaaagacatagttatgaaggatgacacaggaaaagggccatgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcgtactcgggcagccaaagacatagttatgaaggatgacacaggaaaagggccatgg 560
Query: 360 gagccaaaaatagacagtgtagggaactagaggagaaaaggatggtccttcagggcagag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagccaaaaatagacagtgtagggaactagaggagaaaaggatggtccttcagggcagag 620
Query: 420 ataaatagctctccaaagtgccagatatcatggggctgtgacttgcctacccactgtggg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaatagctctccaaagtgccagatatcatggggctgtgacttgcctacccactgtggg 680
Query: 480 tt 481
||
Sbjct: 681 tt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
