Query= MSMg01no079_g04.b1 MSMg01no079_g04.b1 CHROMAT_FILE:
MSMg01no079_g04.b1 PHD_FILE: MSMg01no079_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:00 2005
(556 letters)
>mm_chr13_43752442_43753397
Length = 956
Score = 1038 bits (537), Expect = 0.0
Identities = 549/553 (99%)
Strand = Plus / Minus
Query: 4 ggaattcccacgtttctgctctgaaggttaagactcctcccgagatgacagaagtccgga 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattcccacggttctgctctgaaggttaagactcctcccgagatgacagaagtccgga 697
Query: 64 tacaagagagcacttgtaagacagagataaaggtggtcatactgcttactattccagggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tacaagagagcacttgtaagacagagataaaggtggtcatactgcttactattccagggc 637
Query: 124 tctgttctgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tctgttctgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattct 577
Query: 184 gtttcttcagactatctcagggacagatttcatgtagtccgagtcatgctcacaaaggcc 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 576 gtttcttcagactatctcagggacaggtttcatgtagtccgagtcatgctcacaaaggcc 517
Query: 244 gtcaactgttagaacttggcattagtgggataggttaccattttccctgtatggaaccac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtcaactgttagaacttggcattagtgggataggttaccattttccctgtatggaaccac 457
Query: 304 aactactaagtgtcaccttcatttcctggatactcctcccatcccagcgaataaatataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aactactaagtgtcaccttcatttcctggatactcctcccatcccagcgaataaatataa 397
Query: 364 tcatcactgccgggagatgatgggatgatatgtctcacatggatgcaagtgtcgtggtca 423
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tcagcactgccgggagatgatgggatgatatgtctcacatggatgcaagtgtcgtggtca 337
Query: 424 ttatctgtggctactgctactggtgatggtgccaaaggcttgctcctcttcatgatggtg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttatctgtggctactgctactggtgatggtgccaaaggcttgctcctcttcatgatggtg 277
Query: 484 acagtgccaaaagtttccttctctccatggtggcaacagtgctgaagacttgttcctctc 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acagtgccaaaagtgtccttctctccatggtggcaacagtgctgaagacttgttcctctc 217
Query: 544 cagtttcttttgt 556
|||||||||||||
Sbjct: 216 cagtttcttttgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_g04.g1 MSMg01no079_g04.g1 CHROMAT_FILE:
MSMg01no079_g04.g1 PHD_FILE: MSMg01no079_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:00 2005
(511 letters)
>mm_chr13_43581711_43582623
Length = 913
Score = 953 bits (493), Expect = 0.0
Identities = 508/513 (99%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 1 ccccttaa-tttttctttcc-aactcctgtggcttttctcttacttggcaaaggtcatgc 58
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccttaattttttctttccaaactcctgtggcttttctcttacttggcaaaggtcatgc 260
Query: 59 cctcttttccacacagatgtctcccgtttttattgctgctaactgacatgcggaaagcat 118
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcttttccgcacagatgtctcccgtttttattgctgctaactgacatgcggaaagcat 320
Query: 119 tcaaaatggagcagccacggaaaacaagacagcaagagctcatgtcctccctctgtgctt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaatggagcagccacggaaaacaagacagcaagagctcatgtcctccctctgtgctt 380
Query: 179 ctgtatcaaaggtcaagttcacgatgaaatggtagacagggaaggctgacccagaaagtc 238
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ctggatcaaaggtcaagttcacgatgaaatggtagatagggaaggctgacccagaaagtc 440
Query: 239 tgagccccagggaaaggctcctgccatccttggaggggctgctatagttaagcccgatgc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagccccagggaaaggctcctgccatccttggaggggctgctatagttaagcccgatgc 500
Query: 299 tctcgtactcgggcagccaaagacatagttatgaaggatgacacaggaaaagggccatgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcgtactcgggcagccaaagacatagttatgaaggatgacacaggaaaagggccatgg 560
Query: 359 gagccaaaaatagacagtgtagggaactagaggagaaaaggatggtccttcagggcagag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagccaaaaatagacagtgtagggaactagaggagaaaaggatggtccttcagggcagag 620
Query: 419 ataaatagctctccaaagtgccagatatcatggggctgtgacttgcctacccactgtggg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaatagctctccaaagtgccagatatcatggggctgtgacttgcctacccactgtggg 680
Query: 479 ttggcccaaaaactggcctgcatgccttccacc 511
|||||||||||||||||||||||||||||||||
Sbjct: 681 ttggcccaaaaactggcctgcatgccttccacc 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 913
Length adjustment: 10
Effective length of query: 501
Effective length of database: 903
Effective search space: 452403
Effective search space used: 452403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
