Query= MSMg01no079_h17.b1 MSMg01no079_h17.b1 CHROMAT_FILE:
MSMg01no079_h17.b1 PHD_FILE: MSMg01no079_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:07 2005
(612 letters)
>mm_chr13_25846601_25847615
Length = 1015
Score = 1112 bits (575), Expect = 0.0
Identities = 602/611 (98%), Gaps = 3/611 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttattctactgccagaattggcctgccagaaactcagcatacagcagacca 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttattctaatgccagaattggcctgccagaaactcagcatacagcagacca 263
Query: 64 gaaaaagcagtatttcctgtcttaccacaaccactgaaaacacacagtggtgtgttctta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaaaaagcagtatttcctgtcttaccacaaccactgaaaacacacagtggtgtgttctta 323
Query: 124 tttctttagtatgacctttttgtttatagataacgaaagagtaaggattggggagccatt 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tttctttagtatgacctttttgtttatagataaagaaagagtaaggattggggagccatt 383
Query: 184 attttagaaattgcaatccctgtcggaaaaaatggaatagcttaaaacacctgtggtaga 243
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 384 attttagaaattgcaatccctgtgggaaaaaatggaatagcttaaaacacctttggtaga 443
Query: 244 aagctacatgccttgct-c-t-cctgggcttaaacctgggcatacttttgtttaggagac 300
||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagctacatgccttgctacatgcctgggcttaaacctgggcatacttttgtttaggagac 503
Query: 301 taaaaatataaaatcattgagttaatttaaattaaaacatgagatgtaagaggctgctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaaaatataaaatcattgagttaatttaaattaaaacatgagatgtaagaggctgctga 563
Query: 361 gttttcggagcctatctgattaaccaacctattatgatgtgggtttggtaaaagattagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttttcggagcctatctgattaaccaacctattatgatgtgggtttggtaaaagattagc 623
Query: 421 aaagctgcgcctacttaaaagattaacctcctagccaactgccagggctgggatcagcat 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaagctgcgtctacttaaaagattaacctcctagccaactgccagggctgggatcagcat 683
Query: 481 agatagagaagactcgtcaatgactaagagatctgcttcacagtgacactttcaaatgag 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agatagagaagactcttcaatgactaagagatctgcttcacagtgacactttcaaatgag 743
Query: 541 gaaagggatctctgagatgatgttttgtgttatataaatggtattgactaaatagtattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaaagggatctctgagatgatgttttgtgttatataaatggtattgactaaatagtattt 803
Query: 601 ttattcaaaac 611
|||||||||||
Sbjct: 804 ttattcaaaac 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1015
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1005
Effective search space: 605010
Effective search space used: 605010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_h17.g1 MSMg01no079_h17.g1 CHROMAT_FILE:
MSMg01no079_h17.g1 PHD_FILE: MSMg01no079_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:07 2005
(591 letters)
>mm_chr13_25956300_25957290
Length = 991
Score = 1112 bits (575), Expect = 0.0
Identities = 587/591 (99%)
Strand = Plus / Minus
Query: 1 ctggctttgagttttgctctcattttcccacatggccttggctttagcgtgcaactcagc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 791 ctggctttgagttttgctctcattttcccacatggccttggctttagcatgcaactcagc 732
Query: 61 atgaatttttagatcagttcaagaaaggagcttaaatatgtcaaaatgtctactatcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atgaatttttagatcagttcaagaaaggagcttaaatatgtcaaaatgtctactatcctc 672
Query: 121 tgattgatgtccaattaggaaatctagtttggagagattgacctcaccctaaggctcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgattgatgtccaattaggaaatctagtttggagagattgacctcaccctaaggctcctt 612
Query: 181 aatgtcacatatactctgtgtcccattgatcaatcttattttgaaaactcaatcacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aatgtcacatatactctgtgtcccattgatcaatcttattttgaaaactcaatcacatga 552
Query: 241 ctctaaatatttaagtgagaatagcagagatgctcaggcaatggtcctgcctgtgtgtgt 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 551 ctctaaatatttaagtgagaatagcagagatgctcaggcaatggtcttgcctgtgtgtgt 492
Query: 301 acacagactcctgagtcagaaccacttgcctggaaaataaccagaagtacctggaagtcc 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 491 acacagactcctgagtcagaaccacttgcctgcaaaataaccagaagtacctggaagtcc 432
Query: 361 atttaattagtcagagtcaacaagtttctaataaactggaaattcatcctggaaaacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atttaattagtcagagtcaacaagtttctaataaactggaaattcatcctggaaaacata 372
Query: 421 ctagtcacattctacaaatgattgattttgggttacaaaaagtccctgtttaatcagatt 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 371 ctagtcacattctacaaatgattgatttggggttacaaaaagtccctgtttaatcagatt 312
Query: 481 aaggttctaagagctcttaaagaccaataaatctcatatcttaacatgtcacccaaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaggttctaagagctcttaaagaccaataaatctcatatcttaacatgtcacccaaacac 252
Query: 541 acttaactataaaacatgtttctcctgtcacacatatggatactgctgttc 591
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acttaactataaaacatgtttctcctgtcacacatatggatactgctgttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
