Query= MSMg01no079_i17.b1 MSMg01no079_i17.b1 CHROMAT_FILE:
MSMg01no079_i17.b1 PHD_FILE: MSMg01no079_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:12 2005
(585 letters)
>mm_chr13_87221344_87222328
Length = 985
Score = 673 bits (348), Expect = 0.0
Identities = 354/356 (99%)
Strand = Plus / Minus
Query: 230 ttgtttttgatcttagtcattctgattgatgtagtaaggtggatacacttaaataaaatg 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ttgtttttgatcttagtcattctgattgatgtagtaaggtggatacacttaaataaaatg 873
Query: 290 tgtttgaaaggtaaactatatagacattggcattatttaacaaattaaattaattgtaaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tgtttgaaaggtaaactatatagacattggcattatttaacaaattaaattaattgtaaa 813
Query: 350 agtttgtatatgattttttaaaatttaccaaatatatgtatttccagaaatgtctcgtag 409
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 agtttgtatatgatttttaaaaatttaccaaatatatgtatttccagaaatgtctcgtag 753
Query: 410 tcctttttaaattagttatttgagtggttcatatttcctacaaggttgttgatcatattt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcctttttaaattagttatttgagtggttcatatttcctacaaggttgttgatcatattt 693
Query: 470 acccacgtctctaatttttcaaatattcatccctccttcccttcccacacaaatttattg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acccacgtctctaatttttcaaatattcatccctccttcccttcccacacaaatttattg 633
Query: 530 tgttttgctttgttttagacccttcaaaacaagttattagtgtgaaaatattattg 585
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 632 tgttttgctttgttttagacccttcaaaacaagttattagtgtaaaaatattattg 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_i17.g1 MSMg01no079_i17.g1 CHROMAT_FILE:
MSMg01no079_i17.g1 PHD_FILE: MSMg01no079_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:12 2005
(514 letters)
>mm_chr13_87095913_87096816
Length = 904
Score = 679 bits (351), Expect = 0.0
Identities = 395/415 (95%), Gaps = 12/415 (2%)
Strand = Plus / Plus
Query: 101 aaaa-agcacggtgagactgtgttttactaaggaaagaaatgtttcctcagcaacaattt 159
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 aaaagagcacagtgagactgtgttttactaaggaaagaaatgtttcctcagcaac-attt 359
Query: 160 tttttttttgttcaacaacagtctgacacattaataatcttcttttacttgctgtgatgt 219
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttttttt-----caacaacagtctgacacattaataatcttcttttacttgctgtgatgt 414
Query: 220 gtcttataaccaaaactgtaaaatgtttaattaaacaccttcattaaagtctgcctaaag 279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 -----ataaccaaaactgtaaaatgtttaattaaacaccttcattaaagtctgcctaaag 469
Query: 280 aaatcaattttagtatttaacagacagtaactatacacattcctgatagatttaaataga 339
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 470 aaatcaattttagtttttaacagacagtaactatgcacattcctgatagatttaaataga 529
Query: 340 cacatctggtgcagtgtgcactggatttttgttatttttgtctgtactatttagttttta 399
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cacaactggtgcagtgtgcactggatttttgttatttttgtctgtactatttagttttta 589
Query: 400 aaacacataatggttatgaaagtaattttggataatttgcatctcataaagatacatttt 459
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 590 aaacatataatggttatgaaagtaattttggataatttgcatcccataaagatacatttt 649
Query: 460 tcagtccttgtaagtattaatatatccaactactagaaaatacttcttcaagcag 514
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 650 tcagtccttgtaagtattaatatatccaagtactagaaaatagttcttcaagcag 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 904
Length adjustment: 10
Effective length of query: 504
Effective length of database: 894
Effective search space: 450576
Effective search space used: 450576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
