Query= MSMg01no079_n05.b1 MSMg01no079_n05.b1 CHROMAT_FILE:
MSMg01no079_n05.b1 PHD_FILE: MSMg01no079_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:33 2005
(648 letters)
>mm_chr13_69850541_69851588
Length = 1048
Score = 1220 bits (631), Expect = 0.0
Identities = 640/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 7 gaattcttattcccc-cagtggcttcttgtgccaggtatcctaccacagagacaagaaaa 65
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttattccccaaagtggcttcttgtgccaggtatcctaccacagagacaagaaaa 265
Query: 66 gtttaaccagggctgtcgagatggctcagcgggtaagagcactgactgctcttttgaagg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtttaaccagggctgtcgagatggctcagcgggtaagagcactgactgctcttttgaagg 325
Query: 126 tcctgagttcaattcccagcaatcacatggtggctcacaaccacccgtaatgagaactga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcctgagttcaattcccagcaatcacatggtggctcacaaccacccgtaatgagaactga 385
Query: 186 tgccctcgtctggcacgtctgaagacagctacagtgtaatcatgtataataataaataaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgccctcgtctggcacgtctgaagacagctacagtgtaatcatgtataataataaataaa 445
Query: 246 tctttgggcctgagagagcggagttgaccggagtgagtggggctgaccggagtgagcagg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tctttgggcctgagagagcggagttgaccggagtgagtggggctgaccggagtgagcagg 505
Query: 306 gttgactagagggagcagaggtcctaaaaattcaattcccaacaaacacatgaagtctca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gttgactagagggagcagaggtcctaaaaattcaattcccaacaaacacatgaagtctca 565
Query: 366 cagtcatctatctgttcagccacagtgcacctctatacataaaataaataaataaatctt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cagtcatctatctgttcagccacagtgcacctctatacataaaataaataaataaatctt 625
Query: 426 taaaaaaaagtttaactaatgcagatggctatttggttacaacgcatcaaaacttgagaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 taaaaaaaagtttaactaatgcagatggctatttggttacaacgcatcaaaacttgagaa 685
Query: 486 ctctcctgcttttattgttttaatagctgctgcatttgagaaaatgtttctttaacagaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctctcctgcttttattgttttaatagctgctgcatttgagaaaatgtttctttaacagaa 745
Query: 546 ggctcagtatatccatgaaggagccctaagggggcagcctagagttcccaagggctggaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggctcagtatatccatgaaggagccctaagggggcagcctagagttcccaagggctggaa 805
Query: 606 aagtaactgtcatttgaatagtccccagtgggcgctagagaca 648
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 806 aagtaactgtcatttgaatagtccccagtgggtgctagagaca 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_n05.g1 MSMg01no079_n05.g1 CHROMAT_FILE:
MSMg01no079_n05.g1 PHD_FILE: MSMg01no079_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:33 2005
(575 letters)
>mm_chr13_69952916_69953890
Length = 975
Score = 1112 bits (575), Expect = 0.0
Identities = 575/575 (100%)
Strand = Plus / Minus
Query: 1 ctcagtccaagctgacaggggaaatgatgcaggggctcagggttatcctgaccaacccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctcagtccaagctgacaggggaaatgatgcaggggctcagggttatcctgaccaacccca 716
Query: 61 ctctgcagcacatgatctgacagagccccttgctcactccagctgcaggctctctgggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctctgcagcacatgatctgacagagccccttgctcactccagctgcaggctctctgggct 656
Query: 121 gcctgcacacagcagacacacccagcacgtgtaggccaggctggcatcaggcaagtggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gcctgcacacagcagacacacccagcacgtgtaggccaggctggcatcaggcaagtggcg 596
Query: 181 agcagcacaggtagagcaagcaatgctggagtgaggctggcagggcagtggacagtgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agcagcacaggtagagcaagcaatgctggagtgaggctggcagggcagtggacagtgggt 536
Query: 241 ggagagaaagttacggacaccccaaccagcaccctgcacaaggaactcttgttgaggaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggagagaaagttacggacaccccaaccagcaccctgcacaaggaactcttgttgaggaag 476
Query: 301 gccaggctgagctgtcacaggaagcaaagctggctgagctgaggaggaggctcactgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gccaggctgagctgtcacaggaagcaaagctggctgagctgaggaggaggctcactgtgc 416
Query: 361 aaaaggaacatgaattccaggccgaggagaacaacccaaaacagggcctggtggctaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaaaggaacatgaattccaggccgaggagaacaacccaaaacagggcctggtggctaacg 356
Query: 421 gggagccaggaaacaagggcacacagtgctgtccctgtaaccacacacagagcacccatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gggagccaggaaacaagggcacacagtgctgtccctgtaaccacacacagagcacccatc 296
Query: 481 tgaaaagcaagcaccgtcagtgacctcagtgagaaaactgtagtccatgtcaagacacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaaaagcaagcaccgtcagtgacctcagtgagaaaactgtagtccatgtcaagacacag 236
Query: 541 ctccctagagcagccaagttctctgtgtgccgtgt 575
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ctccctagagcagccaagttctctgtgtgccgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
