Query= MSMg01no084_a08.b1 MSMg01no084_a08.b1 CHROMAT_FILE:
MSMg01no084_a08.b1 PHD_FILE: MSMg01no084_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:56 2005
(372 letters)
>mm_chr13_58748657_58749430
Length = 774
Score = 629 bits (325), Expect = 0.0
Identities = 355/367 (96%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 10 gaattcaggggagatcacgcaaagtgtagtgtagaaaatgagcaaattttgctgcagaaa 69
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaattcaggggagat-acgcaaagtgtagtgtagaaaatgagcaaattttgctgcagaac 393
Query: 70 aaaagggggac----acgggagccttttatagctttttctctgatggtccccttaagcct 125
|||| |||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 392 aaaa-ggggacatggaggggggccttttatagctttttctctgagggtccccttaagcct 334
Query: 126 ggactcccaattgcttgctcaactcattcattttacacatgaaaggagagatgacacagt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggactcccaattgcttgctcaactcattcattttacacatgaaaggagagatgacacagt 274
Query: 186 ctggtgtctgcggtggctgaaggaaggggtacagatgcccctccttacactgtaaaatga 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctggtgtctgcggtggctgaagggaggggtacagatgcccctccttacactgtaaaatga 214
Query: 246 ctcctgggggccactacagaaaaccacaggcaggcaaagtgcacagttgtgtgcaaggca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctcctgggggccactacagaaaaccacaggcaggcaaagtgcacagttgtgtgcaaggca 154
Query: 306 ttcgcaagggatgagtctaccacccgcctccagcacccatagctcagggctggaaagatc 365
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 153 ttcgcaagggatgagtctaccacctgcctccagcacccatagctcagggctggaaagatc 94
Query: 366 ctaagag 372
|||||||
Sbjct: 93 ctaagag 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 774
Length adjustment: 9
Effective length of query: 363
Effective length of database: 765
Effective search space: 277695
Effective search space used: 277695
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_a08.g1 MSMg01no084_a08.g1 CHROMAT_FILE:
MSMg01no084_a08.g1 PHD_FILE: MSMg01no084_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:56 2005
(290 letters)
>mm_chr13_58597673_58598362
Length = 690
Score = 429 bits (222), Expect = e-125
Identities = 264/290 (91%), Gaps = 20/290 (6%)
Strand = Plus / Plus
Query: 1 cactcacaaatccacccactcaggcctcgttctctctcatagatctgcatgcctgacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactcacaaatccacccactcaggcctcgttctctctcatagatctgcatgcctgacatt 260
Query: 61 gtctagcgatgaattcccccctcccacatggagtcttcccaggacagcagcaccagaacg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gtctagcgatgaattcccccctcccacatggagtcttcccaggacagcagcaccggaacg 320
Query: 121 caatgtctttctctgaatttatatcctatggtgtgtacctgacttctaatctatgacgtg 180
|| ||||||||||||||||||||||||||||||||||| | |
Sbjct: 321 cagtgtctttctctgaatttatatcctatggtgtgtac--g------------------g 360
Query: 181 tgtccatgccttgctgtgacaatgagatgacaaagttcttgtgaacctgtcattgtcatc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtccatgccttgctgtgacaataagatgacaaagttcttgtgaacctgtcattgtcatc 420
Query: 241 tctgctccctcagtatggagggtccactgatggggatttactgactgtgg 290
||||| ||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 421 tctgccccctcagtatggaggatccactgatggggattaactgactgtgg 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
