MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-085D17
Chromosome	13 (Build37)
Map Location	38,622,420 - 38,622,520
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042802, LOC100041624, Rreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik, Bmp6, Txndc5
Downstream gene	Muted, Eef1e1, LOC621102, Slc35b3, EG666867, LOC100041779
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041624 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rreb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68750 MGI:2443664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ssr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107513 MGI:105082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cage1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71213 MGI:1918463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Riok1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71340 MGI:1918590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dsp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109620 MGI:109611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 68 ESTs, 6 Proteins

name	6530403A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67797 MGI:1915047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bmp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12161 MGI:88182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105245 MGI:2145316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Muted (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17828 MGI:2178598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eef1e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66143 MGI:1913393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Slc35b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108652 MGI:1913978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666867 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666867 MGI:3644015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041779 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263973 GeneID:100042802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042802 transcript_id : XM_001478877.1

name	LOC100041624 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263946 GeneID:100041624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041624 transcript_id : XM_001476710.1

name	Rreb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719310 GeneID:68750 MGI:2443664
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ras responsive element binding protein 1 transcript_id : NM_026830.1

name	Rreb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719304 GeneID:68750 MGI:2443664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ras responsive element binding protein 1 transcript_id : NM_001039188.1

name	Rreb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719306 GeneID:68750 MGI:2443664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ras responsive element binding protein 1 transcript_id : NM_001013392.3

name	Ssr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982665 GeneID:107513 MGI:105082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal sequence receptor, alpha transcript_id : NM_025965.2

name	Cage1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58000406 GeneID:71213 MGI:1918463
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cancer antigen 1 transcript_id : NM_027724.1

name	Riok1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22208994 GeneID:71340 MGI:1918590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIO kinase 1 (yeast) transcript_id : NM_024242.2

name	Dsp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394767 GeneID:109620 MGI:109611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 67 ESTs, 5 Proteins product : desmoplakin, transcript variant 1 transcript_id : XM_621314.3

name	Dsp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394768 GeneID:109620 MGI:109611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 62 ESTs, 5 Proteins product : desmoplakin, transcript variant 2 transcript_id : XM_896350.2

name	6530403A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067103 GeneID:67797 MGI:1915047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6530403A03 gene transcript_id : NM_026382.2

name	Bmp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131176 GeneID:12161 MGI:88182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 6 transcript_id : NM_007556.2

name	Txndc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921611 GeneID:105245 MGI:2145316
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 5 transcript_id : NM_145367.3

name	Muted (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20532341 GeneID:17828 MGI:2178598
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muted transcript_id : NM_139063.1

name	Eef1e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102406 GeneID:66143 MGI:1913393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation elongation factor 1 epsilon 1 transcript_id : NM_025380.2

name	Slc35b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802590 GeneID:108652 MGI:1913978
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member B3 transcript_id : NM_134060.3

name	LOC100041779 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263948 GeneID:100041779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100041779 transcript_id : XM_001476997.1

name	LOC100042802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263974 GeneID:100042802
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478927.1

name	LOC100041624 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263947 GeneID:100041624
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476760.1

name	Rreb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719305 GeneID:68750 MGI:2443664
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ras responsive element binding protein 1 isoform 2 protein_id : NP_001034277.1

name	Rreb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719311 GeneID:68750 MGI:2443664
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3 product : ras responsive element binding protein 1 isoform 2 protein_id : NP_081106.1

name	Rreb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719307 CCDS:CCDS26458.1 GeneID:68750 MGI:2443664
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ras responsive element binding protein 1 isoform 1 protein_id : NP_001013410.3

name	Ssr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982666 CCDS:CCDS26459.1 GeneID:107513 MGI:105082
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : translocon-associated protein alpha product : signal sequence receptor, alpha protein_id : NP_080241.2

name	Cage1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58000407 CCDS:CCDS26460.1 GeneID:71213 MGI:1918463
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : cancer/testis antigen 3 product : cancer antigen 1 protein_id : NP_082000.1

name	Riok1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22208995 CCDS:CCDS26461.1 GeneID:71340 MGI:1918590
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] codon_start : 1 product : RIO kinase 1 protein_id : NP_077204.2

name	Dsp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950147 GeneID:109620 MGI:109611
definition	codon_start : 1 product : desmoplakin isoform 1 protein_id : XP_621314.2

name	Dsp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950149 GeneID:109620 MGI:109611
definition	codon_start : 1 product : desmoplakin isoform 2 protein_id : XP_901443.1

name	6530403A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067104 GeneID:67797 MGI:1915047
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 product : U11/U12 snRNP 48K protein_id : NP_080658.2

name	Bmp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680798 CCDS:CCDS26462.1 GeneID:12161 MGI:88182
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0040007 - growth [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0001649 - osteoblast differentiation [Evidence IGI] codon_start : 1 product : bone morphogenetic protein 6 protein_id : NP_031582.1

name	Txndc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921612 CCDS:CCDS26463.1 GeneID:105245 MGI:2145316
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005788 - endoplasmic reticulum lumen [Evidence IDA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 note : endoplasmic reticulum protein ERp46 product : thioredoxin domain containing 5 protein_id : NP_663342.3

name	Muted (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20532342 CCDS:CCDS26464.1 GeneID:17828 MGI:2178598
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0048066 - pigmentation during development [Evidence IMP]; GO:0016192 - vesicle-mediated transport [Evidence IMP] codon_start : 1 product : muted protein_id : NP_620702.1

name	Eef1e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384756 CCDS:CCDS26465.1 GeneID:66143 MGI:1913393
definition	GO_component : GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence NAS]; GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006281 - DNA repair [Evidence NAS]; GO:0009790 - embryonic development [Evidence NAS]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0043517 - positive regulation of DNA damage response, signal transduction by p53 class mediator [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence NAS] codon_start : 1 product : eukaryotic translation elongation factor 1 epsilon 1 protein_id : NP_079656.1

name	Slc35b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527276 CCDS:CCDS26466.1 GeneID:108652 MGI:1913978
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005351 - sugar porter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 35, member B3 protein_id : NP_598821.1

name	LOC100041779 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263949 GeneID:100041779
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477047.1

name	LOC621102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621102
definition	number : 1 pseudo : _no_value

name	EG666867 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666867
definition	number : 1 pseudo : _no_value

clone name	MSMg01-152H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472G16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-466N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-217C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-428M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-085D17.T7 (MSMg01no085_d17.b1)	MSMg01-085D17.TJ (MSMg01no085_d17.g1)
ACC	AG304877	AG304878
length	1,345	1,089
length of high quality (start - end)	54 (62 - 115)	101 (119 - 219)
definition	CHROMAT_FILE: MSMg01no085_d17.b1 PHD_FILE: MSMg01no085_d17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:43 2005	CHROMAT_FILE: MSMg01no085_d17.g1 PHD_FILE: MSMg01no085_d17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:35:43 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GCATAGAGGGCAATGAAATCCCGTAACCACTTATAGATCGCCTGTATTCT AGGCACCCCTCACTCCTAAGGAGAAATTGGCATATATATATATATATATA TATATATATATATCTCTCTATATATAGAGAGATTCTTCTCCTCTTTCCTT CTCCTCCCTGTTCCTCTTCCCCTTCTTTTTTCGTTCTTCCCCCCCTCTTC TTTTTTCCCCTTCTTTCCTCTGCTCTCCTCTTTTCTTCCTCTCTCCGTTT CTGCTCTTCTCCCTCTTTTTTTTCTTTCTTCTCTCTCCCTCCTTTTTTTT TCCTTCCCTTCTCCTTCTTCTTTCTCTTCTCCCTTTCTCTTGCCTCTTCC CCTCTTCTCTCCTTTTTTTTTTTTTTCCCCCCTCTGCTCCTTTCTCCCTT TCCCTCCCTTTTTTTCTCTTTCCTCCCCCCCCCCTCTTTCTCTCTTCTCT CCCTTCTCTCTTTCCCCTTTCTCTTCTTCCCTTTTCTTCCTCTTTCTCCT CTCTCTCCCTTCTTTCTCTCCGTTTCCTCTCGCCTCCTCCCTTCCTCCCC CTTCTTTCCCCCTTCTCCCCGTCTTCTCCTTTCCCTTCTTCTTCTCTTCT TTTGTTTTCCTTCTTCTCTCCTCCTCTCTTTTCCTTCTTTCCTTTTTTTC TTTCTTTTTTGTTCTTTTTCCTCTTCTTTTTCTCTTTCTCTCCTTTCTTT TCCTGTTCTTTTGTTCCTCTCTCCGTTCGCCCCTTTCTCTTCTCTTTCTT CTTCTCCTTTCTCTTCATTCTCTCTTCTCTTTCTTCTTTCTTCTTCTCTC TTTCCCTCTCTTGCTCTTTCTTCTTGTTCCTTCTCTCCTTCCTGCTCTCC CTTCTCTCTTTTCTTTTCCCTTTCCTGTCTCTCTCTTTCCTTCTTTTTTC TTCCTTTTTCTGTTTTTCCCTCGCTTCTTCTTTTTCTTCTCTGCTCTCCT TTCTCTCCCTTCCTTCCCTCTTTCCTTTTCTCTCCTCCCTTCTCTCTTTT CTCTTCTTCTCTTCTTCTCCCCTCCTTCTCTTCTCTCACCTCCTTCTCTC TTTCCCTCCCTCCATTTTCTCTTCTTCTCCTCTCCCCTTTTCTCTTCTCT TCCTTCTTTTTTATTCTCCCCTTGTCTCTTCTCTTCATTCTCTCCCTTTT CTCTCCTCTTCTCTCCTTTCCTCTTTTTCTTTTCTTTCCTCTTTTTGTTT TCTTCTCCCTTCTCTTCCCTTCTCGTCCTCTTTTCTCTTCTCCTTTCTCT CGTCTCNTCTCTTGTTCTGTCCTCCTTTCTCTTTTTTCCTCCTCTTCTCC CTCTCTCTCTCCCTCCTCCTCCTTTCTCCTCTCTCTCTGCTCTTC	AATCATAAGAACTCCCNNNNAGAANNANNCCNGGNGANNNNGCTTAAAAA GCCCCCCCANCAGGAACCCCNNAANACAAGGGAACCNAGAACGCNNACGG NNNCNAANANCNGCCCCAAGGTGCTAGGGTTTGGGTCTTGAATGTAAACT TCTGTGGGTCCATGTGTTGGAGACCTATCTCCAGAGTGGTGCTAGTGGAA GGGGGTAGAACTTTTAGATGCAGAGTGCGAGGTTTTAAGATCATTGAAGG TGTGTCTTCTTTTCCAATCTCAGGAGCCCTACCACTCATTCCCTGCCTCC TAAGGTGAGGAGCTGTATTCCCACCCTGGTTTTTTTTTTAAAGCACCGAG GCGGCCACGAACACCGCCCAAAACCCCCCCCCCCGACAGNCAAACACCCA ACAACACCGAGACACAGGACAAAACAGCAGCGCCCAACCCACGCGCAGGC ACACCGCCACAGGAACAGACACCGCCACCGCCGCGCAGGCCCCCAGGCAC CCGGAAAGGCCACAGCACCAGACAACGACAACCCGACCAAGAACACCCCA CCGACCGCGACCCCCCCGCCCCAACGAACCCAGGACCGACAACCCCCCCC GACCCCCGCACCCCCACGGCCCCCCGGCCCCAGACACACAACCCCCCCCG CGCACACGACACAAGCCCCAGCACACCCCACAGACCCAGACCCCCCCACC GCCCCCCTTTTTTTTTTTTTCACACCCGCACCCCCTATTTTTTCTTCTCT TCTCTCACCTTTCCTTCTCTCCTCTCCTACCCCCTTTTTTCTCTTTTTTT TTTTTTCTCCCCTCCCCCTTCCTCTTCCTCTCTCTTTTCTTTCCTCCTAA CTCCATCCTTCTTTACTCTTATCTTTCTCTTCTCTTTTCTCTTTTCTTTT TCCTTTGTTTTTTTTTCTCTTCCTTCTTTTTTTTTTTTTTTTTTCTTTTT TCCTTCTTTTTTCCTTCTTTTTCTTTCTTTCACTTCTTTCTCTTCTTCTT TTTCATCTACTTTTTTCTCTCTCTTTCTACCTTTCCTCTTTCCCCTCCTT TCCTTCTTCCTTATCTTCTCATCCTTTTATTATTTTCTT
quality values	Open. Hide. 6 6 6 6 8 8 13 10 8 8 6 6 6 10 21 22 25 33 29 29 13 15 12 27 27 36 23 31 18 22 29 34 41 46 37 30 21 21 9 10 12 11 11 9 9 18 18 22 19 13 13 12 12 9 9 9 11 12 11 11 11 16 18 31 36 34 32 25 25 25 34 37 34 33 39 30 29 29 25 25 28 28 17 30 24 37 37 30 28 30 32 32 35 39 35 37 35 35 35 43 43 43 43 43 43 43 39 37 37 30 18 13 11 11 8 8 7 7 8 15 16 24 21 13 13 13 15 21 12 12 11 8 8 6 6 8 12 6 6 8 15 11 8 8 8 8 8 6 6 8 8 10 8 8 10 8 8 8 10 8 8 6 6 8 8 9 10 12 10 12 10 8 8 6 6 8 8 9 9 9 10 11 11 12 15 15 12 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 17 15 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 10 11 11 11 16 9 8 8 8 8 8 10 10 6 6 8 8 8 8 6 6 6 7 10 10 8 8 6 6 8 8 10 17 10 11 11 10 10 13 11 10 10 12 12 13 8 8 6 6 8 8 8 8 6 6 8 6 8 8 8 10 10 9 11 10 10 9 10 10 9 9 9 9 10 10 10 8 8 6 6 8 8 8 15 13 12 8 8 8 8 8 8 10 8 10 8 8 8 8 8 8 9 9 9 11 11 10 8 8 6 6 6 6 6 6 8 8 9 9 10 9 9 9 8 8 8 8 6 6 8 8 10 14 10 10 9 14 14 11 16 10 10 6 6 6 8 6 8 8 9 8 10 8 11 6 7 8 8 10 9 12 10 11 10 8 8 8 8 8 9 8 8 8 8 8 8 10 8 8 8 8 8 8 12 12 16 17 9 9 9 9 9 11 17 22 19 12 10 9 12 10 8 8 8 8 11 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 10 10 10 15 11 10 10 8 8 8 10 15 17 23 10 10 11 11 10 10 15 16 8 8 6 6 8 8 10 10 13 11 9 9 8 8 8 8 10 10 8 10 9 9 10 10 9 9 10 9 9 10 13 11 15 10 10 8 8 9 9 8 8 8 6 7 8 8 9 8 8 6 7 8 8 9 9 8 8 8 8 8 8 12 10 8 13 19 10 10 10 8 8 8 8 8 8 12 8 8 12 10 8 8 8 8 8 6 8 8 10 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 11 11 8 8 8 19 10 8 10 9 10 9 10 9 9 11 15 17 11 12 12 8 8 6 6 8 8 10 10 10 8 11 8 8 8 8 6 6 8 8 8 9 9 8 8 8 8 8 8 9 9 10 9 10 9 10 9 10 10 10 10 10 10 9 7 8 8 10 10 10 9 9 8 8 6 7 8 10 10 10 8 8 8 8 8 8 11 10 8 8 6 6 8 8 8 8 8 8 9 9 9 10 10 11 11 11 10 13 11 8 8 10 15 10 8 8 8 6 6 8 8 9 10 10 10 10 9 8 10 7 6 8 8 8 8 6 6 8 8 9 9 8 8 10 10 8 8 8 10 8 11 15 12 8 8 8 8 6 6 8 8 7 7 8 10 10 12 9 9 10 8 8 8 8 8 9 9 9 9 9 10 10 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 12 8 8 6 6 8 8 8 8 8 8 10 9 9 8 10 8 8 8 6 6 8 8 9 8 8 6 6 8 8 10 11 11 11 11 12 9 9 9 9 9 9 9 8 13 15 12 11 8 8 9 9 9 11 8 8 6 6 6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 10 11 11 11 11 11 11 10 8 8 6 7 8 6 9 9 9 10 10 8 10 13 12 8 8 8 8 8 8 8 8 8 8 10 8 8 12 12 12 7 6 8 8 10 10 8 8 6 6 8 8 11 8 12 8 8 8 8 8 8 8 8 8 8 8 9 9 9 10 9 9 8 12 8 10 8 21 14 16 9 9 10 10 8 8 8 9 9 15 12 11 10 10 10 10 8 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 6 6 8 8 8 12 8 8 8 8 8 8 8 8 7 6 7 7 10 10 6 6 8 8 8 8 8 8 8 10 11 11 11 12 15 11 10 10 13 13 13 10 12 12 15 13 20 15 11 11 18 19 8 8 6 6 8 8 8 8 8 8 8 8 9 12 9 9 8 8 8 12 8 8 8 8 8 8 10 11 11 9 9 9 8 8 8 9 9 9 9 9 10 10 10 10 10 9 9 10 10 9 9 8 8 8 8 8 8 8 8 8 12 9 8 8 8 8 8 10 10 9 6 8 7 7 9 9 10 10 10 11 12 10 11 11 11 9 8 9 9 9 9 8 8 8 8 8 8 9 9 8 10 9 7 10 8 8 8 10 8 6 6 6 7 8 8 8 8 13 10 10 16 16 16 18 18 11 10 8 8 8 8 8 10 10 15 10 8 10 10 10 10 8 9 7 12 10 11 9 9 8 8 8 13 10 10 8 8 8 8 6 6 8 6 6 7 6 8 8 8 7 9 9 8 8 8 6 8 10 10 9 9 12 10 11 10 11 8 8 8 7 8 8 8 8 7 6 8 6 6 8 8 8 8 6 6 8 8 10 10 12 10 11 9 14 10 12 10 11 11 12 8 8 6 6 6 8 8 8 6 3 0 3 6 6 6 8 8 10 10 10 10 8 8 6 6 8 10 8 8 8 10 8 8 8 8 7 7 11 16 12 9 12 19 8 8 8 9 8 8 13 21 11 8 8 6 6 8 12 14 6 6 8 8 10 10 8 8 8 8 6 6 6 8 10 12 10 8 8 8 11 8 10 10 9 9 13 8 8 8 11 18 11 7 8 8 8 8 8 8	Open. Hide. 9 9 9 9 9 9 8 7 6 6 8 6 6 6 10 3 0 0 0 0 3 9 9 3 0 0 3 0 0 3 3 0 3 3 0 3 3 0 0 0 0 3 9 8 7 7 9 8 8 8 8 11 12 9 9 8 15 12 3 0 3 25 25 39 41 47 44 25 27 3 0 0 3 3 0 3 21 21 33 30 37 25 14 7 7 3 0 3 22 22 9 7 7 3 0 0 3 7 7 3 0 0 0 3 0 3 3 0 3 0 3 0 3 8 7 8 9 11 22 23 34 30 28 24 19 19 15 12 12 15 19 25 32 33 39 39 43 43 47 40 40 28 25 25 30 30 37 37 47 48 41 43 32 22 19 24 19 30 32 37 36 30 30 28 32 41 41 44 39 35 35 30 34 36 32 39 42 42 30 28 27 32 32 43 42 32 30 15 14 14 14 27 24 39 26 27 25 20 18 24 15 11 11 19 18 18 25 25 25 41 41 46 47 27 27 12 12 12 32 27 15 13 12 15 13 10 8 8 8 10 15 23 34 26 24 23 33 25 26 28 32 32 35 35 39 39 35 32 32 37 37 41 28 25 17 13 15 9 9 9 10 9 9 9 8 8 8 8 8 15 15 23 23 20 24 21 28 20 28 28 32 33 35 39 32 31 23 23 23 34 41 54 47 47 32 28 23 36 36 36 32 32 15 15 14 18 18 21 15 20 20 28 24 28 23 28 21 14 14 14 31 30 47 34 27 21 11 9 9 9 12 11 14 16 14 14 11 10 11 17 16 14 14 9 15 9 8 10 8 8 8 8 8 12 10 15 9 9 9 12 9 9 6 6 6 8 8 9 21 12 14 14 15 15 11 8 8 12 10 16 10 10 9 10 10 9 9 9 3 0 3 15 12 11 10 10 8 10 8 7 7 7 9 9 9 9 9 10 9 9 9 9 9 9 9 18 12 12 9 9 12 12 17 10 9 9 8 8 8 6 8 8 10 10 17 16 11 11 9 9 9 9 10 10 10 10 10 10 8 8 8 6 6 7 10 8 11 12 8 8 8 8 8 8 9 8 8 8 8 10 8 10 10 17 17 12 8 8 8 6 6 7 10 9 9 13 11 8 8 8 8 8 8 6 6 6 7 7 12 10 16 15 10 8 8 8 6 6 8 8 10 10 6 6 8 8 8 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 9 9 9 9 11 12 12 18 10 10 8 9 8 8 11 12 10 9 9 7 13 9 9 8 15 13 16 14 9 9 10 13 8 11 6 6 6 6 6 8 11 11 12 11 9 9 9 11 9 10 11 9 9 14 10 9 8 8 8 8 8 8 8 10 10 8 8 7 7 7 6 8 8 10 15 12 10 8 8 8 8 6 6 8 8 8 8 6 6 9 10 9 9 9 8 8 8 8 8 8 10 8 10 10 16 8 8 9 9 9 10 10 8 8 6 8 6 6 8 8 9 9 9 10 10 8 8 8 8 8 8 8 8 8 8 9 10 10 11 10 13 10 12 10 9 9 9 9 10 10 10 9 9 9 11 11 10 8 8 8 10 10 8 10 10 8 8 9 10 10 10 23 21 21 18 9 9 9 9 11 11 15 8 8 6 6 8 10 8 6 6 8 8 13 16 19 15 10 10 10 10 13 11 8 8 6 6 8 8 10 10 12 12 11 8 8 6 6 6 6 8 8 8 10 8 8 6 7 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 10 10 10 12 9 9 9 9 7 12 8 12 12 11 10 13 10 10 8 8 10 10 9 7 7 6 8 8 11 10 14 10 13 8 6 8 6 6 8 8 8 10 8 8 8 8 8 8 7 7 8 8 10 14 8 10 10 8 8 8 6 6 6 6 8 8 9 8 8 6 6 8 8 10 10 10 10 10 7 7 8 6 6 8 8 8 6 7 6 6 8 8 8 8 8 8 8 6 7 10 8 9 13 15 15 22 26 31 21 16 16 12 16 16 14 13 10 9 9 10 9 9 9 16 20 24 15 12 11 11 10 10 8 8 8 8 10 8 9 9 10 12 11 10 10 11 10 10 10 8 8 8 8 8 9 15 13 8 10 9 9 12 10 10 8 8 8 8 8 7 7 8 12 10 10 10 8 7 8 8 6 6 8 8 10 13 10 8 8 8 11 8 8 8 10 8 8 8 8 8 11 8 10 10 8 8 8 8 8 8 8 8 9 8 8 10 10 9 9 9 9 9 8 8 6 6 10 8 11 12 8 8 8 15 12 10 8 8 8 8 10 10 10 8 9 9 8 8 8 8 11 8 8 9 10 10 10 12 8 10 6 6 8 8 11 12 9 9 6 6 6 8 8 8 8 8 8 6 8 8 8 8 8 8 6 9 7 10 8 8 8 8 6 6 8 6 6 8 10 10 8 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no085_d17.g1 MSMg01no085_d17.g1 CHROMAT_FILE:
MSMg01no085_d17.g1 PHD_FILE: MSMg01no085_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:43 2005
         (101 letters)



>mm_chr13_38622220_38622720
          Length = 501

 Score =  180 bits (93), Expect = 2e-50
 Identities = 99/101 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtgctagggtttgggtcttgaatgtaaacttctgtgggtccatgtgttggagacctat 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aggtgctagggtttgggtcttgaatgtaaacctctgtgggtccatgtgttggagacctat 260

                                                    
Query: 61  ctccagagtggtgctagtggaagggggtagaacttttagat 101
           |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctccagagtggtgctagtggaagggggtagaatttttagat 301


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 501
Length adjustment: 8
Effective length of query: 93
Effective length of database: 493
Effective search space:    45849
Effective search space used:    45849
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information