Query= MSMg01no086_f24.b1 MSMg01no086_f24.b1 CHROMAT_FILE:
MSMg01no086_f24.b1 PHD_FILE: MSMg01no086_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:06 2005
(527 letters)
>mm_chr13_24494832_24495758
Length = 927
Score = 911 bits (471), Expect = 0.0
Identities = 483/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctatctatcactctttcaatccttattacactctaaccctttcaaccccaca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaattcttctatctaccactctttcaatccttattacactctaaccctttcaaccccaca 427
Query: 65 gcactgggtaggtcaggcatggacctccttaggctgcttcctgctaattagaggcatctg 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcactgggtaggtcaggcatggatctccttaggctgcttcctgctaattagaggcatctg 367
Query: 125 gtctctaggggcaagacagagatcttccttgtcagaatatcaatgtccagaaacccagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 366 gtctctaggggcaagacagagatcttccttgtcagaatatcaatgtccagaaacccaaca 307
Query: 185 atggtaaaccagcaatctattaaaagcaacagcaggaagcagcagccaccacaggccctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atggtaaaccagcaatctattaaaagcaacagcaggaagcagcagccaccacaggccctt 247
Query: 245 ggggctcttctgtttataccttctccagagtcctcagaatttaactatctgcaactggca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggggctcttctgtttataccttctccagagtcctcagaatttaactatctgcaactggca 187
Query: 305 agaatcatgcccctggtagtgcaagaggaaagtcataatcacctgctgtgacacagcctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agaatcatgcccctggtagtgcaagaggaaagtcataatcacctgctgtgacacagcctc 127
Query: 365 ttattccacacctgggattaaaacaaaaacatattcacatagcataactgagtctttaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttattccacacctgggattaaaacaaaaacatattcacatagcataactgagtctttaaa 67
Query: 425 gaaaccagaattctcattacagaagctgtttttttttccctagcaatactattgagagga 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 66 gaaaccagaattctcattacagaagctgttttttttt-cctagcaatactattgagagga 8
Query: 485 ggttaca 491
|||||||
Sbjct: 7 ggttaca 1
Score = 62.6 bits (32), Expect = 7e-14
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 489 acacacacatacacacacacacacacacacagacac 524
||||||||||||||||||||||||||||||| ||||
Sbjct: 542 acacacacatacacacacacacacacacacacacac 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_f24.g1 MSMg01no086_f24.g1 CHROMAT_FILE:
MSMg01no086_f24.g1 PHD_FILE: MSMg01no086_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:06 2005
(584 letters)
>mm_chr13_24423506_24424489
Length = 984
Score = 1091 bits (564), Expect = 0.0
Identities = 579/584 (99%)
Strand = Plus / Plus
Query: 1 aggtcatcaattgggcctgacagcaagttcttttagccactgagccatctctatgacctg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcaccaattgggcctgacagcaagttcttttagccactgagccatctctatgacctg 260
Query: 61 taacctggatcagcagatgttcttcagtgacagagtcctgtgtgggaggtgccaggggat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacctggatcagcagattttcttcagtgacagagtcctgtgtgggaggtgccaggggat 320
Query: 121 gaaagataaagaagatagaagagatggactcaggaggtcttacatatgctgtgacgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagataaagaagatagaagagatggactcaggaggtcttacatatgctgtgacgtatg 380
Query: 181 ccaagcaagcttaagaagcacagcatcatatatgctatttacgggagagaaatgggatga 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ccaagcaagcttaagaagcacagcatcttatatgctatttacgggagagaaatgggatga 440
Query: 241 acccagcagaatctgtcatacagtggacctgacctctgtaagcagagcttctagaagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 acccagcagaatctgtcatacagtggacctgacctctgtaagcagagcttctagaagctg 500
Query: 301 ctgatgcatgccatagtaggctgctggtttgtggaggtgtggcttcagcaagttcttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgatgcatgccatagtaggctgctggtttgtggaggtgtggcttcagcaagttcttgct 560
Query: 361 ggagacctaatgcaaatggcttgatggatttgacacacctgagttgatgccactgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagacctaatgcaaatggcttgatggatttgacacacctgagttgatgccactgaggct 620
Query: 421 gatgaagctctactctgttctagtagcatgccttctgatgtagaacacggcaggcagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatgaagctctactctgttctagtagcatgccttctgatgtagaacacggcaggcagaaa 680
Query: 481 tcccagggaagctcactccatagaggtataaaagctgtagccaataggacgtgctggctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcccagggaagctcactccatagaggtataaaagctgtagccaataggacgtgctggctc 740
Query: 541 acatctgtaatcccagcactcaagaggctgaggtttgagagtgg 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acatctgtaatcccagcactcaagaggctgaggtttgagagtgg 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
