Query= MSMg01no087_a16.b1 MSMg01no087_a16.b1 CHROMAT_FILE:
MSMg01no087_a16.b1 PHD_FILE: MSMg01no087_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:00 2005
(249 letters)
>mm_chr13_73853444_73854092
Length = 649
Score = 377 bits (195), Expect = e-109
Identities = 231/243 (95%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 4 ctggacagccaagttctcagagccagggcacctggaagtataggcccaccgcctggctgg 63
|||||||||||| ||||||||| ||||| | ||||||||||||||||| ||||||||||
Sbjct: 204 ctggacagccaaattctcagagtcaggggagctggaagtataggcccagggcctggctgg 263
Query: 64 a-gagaagccactgacacaagtgtcagaccctgttcctgtgtactgaatgggaggccaga 122
| | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 264 acg-gaagccactgacacaagtgtcaggccctgttcctgtgtactgactgggaggccagg 322
Query: 123 gtgtgggggaaagaagcccttgagaactgtggtgtagcctcttttgctgcacacagacat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtgtgggggaaagaagcccttgagaactgtggtgtagcctcttttgctgcacacagacat 382
Query: 183 cttcagagagaggcagagtcctcttgcttgtatttccacttctcctgtgtcctgtatagt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 383 cttcagagagaggcagagtcctcttgcttgtatttccacttctcctgtgtcctggatagt 442
Query: 243 ccc 245
|||
Sbjct: 443 ccc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_a16.g1 MSMg01no087_a16.g1 CHROMAT_FILE:
MSMg01no087_a16.g1 PHD_FILE: MSMg01no087_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:01 2005
(127 letters)
>mm_chr13_73952921_73953447
Length = 527
Score = 199 bits (103), Expect = 4e-56
Identities = 109/111 (98%)
Strand = Plus / Minus
Query: 1 cctgcttgaagttcccagctcggtgcgtatgaaataaagtggctgagctcccatgacaag 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 311 cctgcttgaagttcccagctcggtgcgtatgaaataaagtggctgagttcccatgagaag 252
Query: 61 agaaagcaggctagctgcagatagccctgcagaacaaaggttctctctgca 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agaaagcaggctagctgcagatagccctgcagaacaaaggttctctctgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 527
Length adjustment: 8
Effective length of query: 119
Effective length of database: 519
Effective search space: 61761
Effective search space used: 61761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
