Query= MSMg01no092_f18.b1 MSMg01no092_f18.b1 CHROMAT_FILE:
MSMg01no092_f18.b1 PHD_FILE: MSMg01no092_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:11 2005
(592 letters)
>mm_chr13_98641953_98642944
Length = 992
Score = 801 bits (414), Expect = 0.0
Identities = 420/422 (99%)
Strand = Plus / Minus
Query: 171 ttgtgggtcatgagcccttctgggggtgtctaaggacctttccacgggggtcaaacatca 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 ttgtgggtcatgagcccttctgggggtgtctaaggacctttccacgggggtcaaacatca 933
Query: 231 gatattctgcatatcaggtgtttacattataattcataacagtagaaaaattatggttat 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gatattctgcatatcaggtgtttacattataattcataacagtagaaaaattatggttat 873
Query: 291 gaagtagcaacaaaagtattgtcgtggttgggggtcaccacaacatagagtcgcagcatt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gaagtagcaacaaaagtattgtcgtggttgggggtcaccacaacatagagtcgcagcatt 813
Query: 351 aggaaagcttcgaagtactgctctgaaacaactctacgagccactttcctctgtgcacga 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 812 aggaaagcttcgaagtactgctctgaaacaactctacgagccactttcctctgtgcatga 753
Query: 411 ggtaaacggcataaggaagcatgctttttcattagccaccttataaaggaaatgatggga 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ggtaaacggcataaggaagcatgctttttcattagccaccttataaaggaaatgatggga 693
Query: 471 ctgaggcaaaagagattgcataagacactgaacagtaagcttacttctgaaactttacgt 530
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgaggcaaaagagcttgcataagacactgaacagtaagcttacttctgaaactttacgt 633
Query: 531 tattcaggcaaagcaagaagtaaggcattgaaaacatggtactggtctttgttatgactt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tattcaggcaaagcaagaagtaaggcattgaaaacatggtactggtctttgttatgactt 573
Query: 591 ca 592
||
Sbjct: 572 ca 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_f18.g1 MSMg01no092_f18.g1 CHROMAT_FILE:
MSMg01no092_f18.g1 PHD_FILE: MSMg01no092_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:11 2005
(606 letters)
>mm_chr13_98606437_98607442
Length = 1006
Score = 1118 bits (578), Expect = 0.0
Identities = 599/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Plus
Query: 1 aaaggtggagatctggagagagcacacaggttgctcaacataggttggtctcaggagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtggagatctggagagagcacacaggttgctcaacataggttggtctcaggagctg 260
Query: 61 gaacattcatcttacaaggactccccattttttacgggcctctcttctctggttttctca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 261 gaacattcatcttacaaggactccccattttttacgggcctctcttctctgggttcctca 320
Query: 121 tatatctgtgccaactatgtgttcatcttaacagaaatgctctttgttcaggcatcaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatctgtgccaactatgtgttcatcttaacagaaatgctctttgttcaggcatcaagg 380
Query: 181 ctatggcaatggcttcagacctgagtgcactgaacctttcagctcagtaacccatagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatggcaatggcttcagacctgagtgcactgaacctttcagctcagtaacccatagcta 440
Query: 241 actggctcaagttcccttaccccaagggtaaaatttcccatcccagctaagatgcccatt 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actggctcaagttcccttactccaagggtaaaatttcccatcccagctaagatgcccatt 500
Query: 301 tctgagctaaacagctgtgacttgaacacatttacgtaatgcactctccaatggcgaggg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 tctgagctaaacagctgtgacttgaacacatttacgtaatgcaatctccaatggcgaggg 560
Query: 361 aagcagagggaccaaaaggcggaatgacttcccaaagaagagccaggagcagacaggcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcagagggaccaaaaggcggaatgacttcccaaagaagagccaggagcagacaggcac 620
Query: 421 acatcagtcaggatccgccatcacaatagaagttcttggggttggcaagcaccatagcaa 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 acatcagtcaggatccgccatcacagtagaagttcttggggttggcaagcaccatagcaa 680
Query: 481 tggcactaacttatttcgttttaggcacagccccaggaaggcatttttcatatccacatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggcactaacttatttcgttttaggcacagccccaggaaggcatttttcatatccacatt 740
Query: 541 ttacagataaggaagctgaggcacagggagcataggtaaatcagccagagtcacatattt 600
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 741 ttacagataaggaagctgaggca-agggagcataggtaaatcaaccagagtcacatattt 799
Query: 601 gataag 606
||||||
Sbjct: 800 gataag 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
