Query= MSMg01no092_k22.b1 MSMg01no092_k22.b1 CHROMAT_FILE:
MSMg01no092_k22.b1 PHD_FILE: MSMg01no092_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:37 2005
(564 letters)
>mm_chr13_21816521_21817478
Length = 958
Score = 567 bits (293), Expect = e-165
Identities = 346/367 (94%), Gaps = 10/367 (2%)
Strand = Plus / Minus
Query: 5 gaattccaggccagcctggtctatggcgtgagttccagggcaaccagggctacacagaaa 64
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 529 gaattccaggccagcctggtctatggagtgagttccagggcaaccagggctacacagaga 470
Query: 65 aaccctgtcttgaacaccctccaccttccaacctccatcccaaacctcctgccccca-ac 123
||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| |
Sbjct: 469 aaccctgtcttgaacaccctccaccttccaacctccacccccaacctcctg-ccccata- 412
Query: 124 cccccccccccaaagaatcagtctcttacaagccccccc-ccctttaaggattagctggc 182
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 411 ----cccccccaaagaatcagtctcttacaagcccccccgccc--taaggattagctggc 358
Query: 183 gctcctactgtttcatggaaggaatggaacagaatatcacccaagcataaaacattgtgc 242
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 357 gctcctactgttgcatggaaggaatggaacagaatatcgcccaagcataaaacattgtgc 298
Query: 243 cttagaaggtaaatcatgtgctagggagatggctcagtggttaagagcattgattgctct 302
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cttagaaggtaaaccatgtgctagggagatggctcagtggttaagagcattgattgctct 238
Query: 303 tccagaggtcctgagttcaaatccgatcaatgacatggtgctcacaaccatttgtaatgg 362
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 237 tccagaggtcctgagttcaaatccgaggaaccacatggtgctcacaaccatttgtaatgg 178
Query: 363 gatctga 369
|||||||
Sbjct: 177 gatctga 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 958
Length adjustment: 10
Effective length of query: 554
Effective length of database: 948
Effective search space: 525192
Effective search space used: 525192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_k22.g1 MSMg01no092_k22.g1 CHROMAT_FILE:
MSMg01no092_k22.g1 PHD_FILE: MSMg01no092_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:37 2005
(608 letters)
>mm_chr13_21748711_21749718
Length = 1008
Score = 1100 bits (569), Expect = 0.0
Identities = 596/605 (98%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 1 tcaccttgttagtccctataacctattacaatattaaagatttaaataagaatgaggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcaccttgttagtccctataacctattacaatattaaagatttaaataagaatgaggtaa 259
Query: 61 aacaaaataagtctcatgggaaactaattcatctggagttgccttaaagggcttgccaag 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 260 aacaaaataagtctcatgggaaactaattcatctggcgttgccttaaagggcttgccaag 319
Query: 121 tttgtgtgtatatagaaatatctactttgtctttcaatttttttccttgccacgtagtgt 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttgtgtatatatagaaatatctactttgtctttcaatttttttccttgccacgtagtgt 379
Query: 181 gaccttgctgccaatttaaataaaagagtgacttaagaagggtctgtcttggcttgtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaccttgctgccaatttaaataaaagagtgacttaagaagggtctgtcttggcttgtagt 439
Query: 241 ttaaaagggattaatactcgagcacagagaggaaccc-tggcagcaatatcatggtgcag 299
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 ttaaaagagattaatactcgagcacagagaggaacccctggcagcaatatcatggtgcag 499
Query: 300 gggtgtgcagatgggactcctcacagcctcagatgtcagtggaacaggaagcagaatgca 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggtgtgcagatggggctcctcacagcctcagatgtcagtggaacaggaagcagaatgca 559
Query: 360 gacaagaaagtagggtgggccagctctcagtgacccacttccattagtgaagtcccatgt 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gacaagaaagtatggtgggccagctctcagtgacccacttccattagtgaagtcccatgt 619
Query: 420 cccacagtgttccacaactttcccacacagtaccaccagctgggcatccagtgtccaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cccacagtgttccacaactttcccacacagtaccaccagctgggcatccagtgtccaaac 679
Query: 480 aagagatcccaatgtggatacttacacagctacagtgtcaacggctcacaataatttcta 539
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 680 aagagatctcaatgtggatacttacacagctacagtgtcaacggctcaaaataatttctg 739
Query: 540 tgacagcagggggaggcactgttgtcagcattgtaaacatgaacagatcaatattcagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgacagcagggggaggcactgttgtcagcattgtaaacatgaacagatcaatattcagag 799
Query: 600 aataa 604
|||||
Sbjct: 800 aataa 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
