Query= MSMg01no096_i02.b1 MSMg01no096_i02.b1 CHROMAT_FILE:
MSMg01no096_i02.b1 PHD_FILE: MSMg01no096_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:53 2005
(617 letters)
>mm_chr13_23729271_23730285
Length = 1015
Score = 1112 bits (575), Expect = 0.0
Identities = 603/613 (98%), Gaps = 2/613 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtagttgtccgtccccaaggctgggtgtcttacctggtcttcagtataagtct 64
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtagttgtcagttcccaaggctgggtgtcttacctggtcttcagtataagtct 264
Query: 65 gaatcccaaaaggaggctctaatgccagcgaaaggaatacctccgtagcatgatacactc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaatcccaaaaggaggctctaatgccagcgaaaggaatacctccgtagcatgatacactc 324
Query: 125 acttgttgtgagagtcagggcaagtagacaaaaatcaaatgtctcccacccccatagcct 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 acttgttgtgagagtcagggcaagtagacaaaaatcaaatgtttcccacccccatagcct 384
Query: 185 ttacataggttgccatcagaagatgtggaccagatttcaggtgggccttcctatctcaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttacataggttgccatcagaagatgtggaccagatttcaggtgggccttcctatctcaga 444
Query: 245 atacccaaccaagaaaatcccctcataagtatgcctagctgcttgagtatgagcgacttt 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 atacccaaccaagaaaatcccctcataaatatgcctagctgcttgagtatgagcgacttt 504
Query: 305 cagaagtagtcaggctgacaaccaagaatagcaccacaggcttgtaacaatcaatctaat 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagaagtagtcaggctgacaaccaagaatagcaccacaggcttgtaacaatcaatctaac 564
Query: 365 cctctataatttacatcagaactgaaacaaacataaagagttgcaagttatacacaatga 424
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 cctctataatttacatcagaactgaaacaaaca--aagagttgcaagttatacacaatga 622
Query: 425 tacatttgtagtttcttgtagagtagatactatgtagcagaaactggtctaagaacgaga 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tacatttgtagtttcgtgtagagtagatactatgtagcagaaactggtctaagaacgaga 682
Query: 485 ttctctcagactttaccataagctcaccagctattactatcatttccacagaagacaaaa 544
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 683 ctctctcagactttaccataagctcaccagctattaccatcatttccacagaagacaaaa 742
Query: 545 ctaaatcagaagaagtaatataacttgtaggtttgtacagctaagagacttacctttgct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctaaatcagaagaagtaatataacttgtaggtttgtacagctaagagacttacctttgct 802
Query: 605 gtcttctcttttg 617
|||||||||||||
Sbjct: 803 gtcttctcttttg 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1015
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1005
Effective search space: 610035
Effective search space used: 610035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_i02.g1 MSMg01no096_i02.g1 CHROMAT_FILE:
MSMg01no096_i02.g1 PHD_FILE: MSMg01no096_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:53 2005
(316 letters)
>mm_chr13_23822104_23822819
Length = 716
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 caggctaaagcgtcagctggctaatcattcactaactattactcagcagattttaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caggctaaagcgtcagctggctaatcattcactaactattactcagcagattttaaagcc 376
Query: 61 cttccacatacagagagttttgatgacaagactgatgacctagaactgtgacagggtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttccacatacagagagttttgatgacaagactgatgacctagaactgtgacagggtaag 316
Query: 121 aagctgaggccgaatcaaaagttccattgtgaatatttgttttactttttattgtttgtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 aagctgaggccgaatcaaaagttccattgtgaatatttgttttactttttgttgtttgtt 256
Query: 181 tgtctttgaaactgagcgtcctgtcagaaagaaaactacaacagccatttatttctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtctttgaaactgagcgtcctgtcagaaagaaaactacaacagccatttatttctcttt 196
Query: 241 ctttctctcttttctctttcttttttcttttttccttttgtgtgtgtgtgt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctttctctcttttctctttcttttttcttttttccttttgtgtgtgtgtgt 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
