Query= MSMg01no099_l16.b1 MSMg01no099_l16.b1 CHROMAT_FILE:
MSMg01no099_l16.b1 PHD_FILE: MSMg01no099_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:21 2005
(511 letters)
>mm_chr13_98656539_98657450
Length = 912
Score = 886 bits (458), Expect = 0.0
Identities = 497/510 (97%), Gaps = 5/510 (0%)
Strand = Plus / Plus
Query: 5 gaattccacagtccacccc-tgtcccctctctcacactgcagtcagagttcaaataaatg 63
||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacag-cc-ccccttgtcccctctctcacactgcagtcagagttcaaataaatg 262
Query: 64 gcaggttccttgtacccagagagctgctcaaggcagccagcagctctctgccttgtggca 123
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaggtttcttgtacccagagagctgctcaaggcagccagcagctctctgccttgtggca 322
Query: 124 attagcagagttcccgcggctccttaagcaatgttgatgggcccttgtctttcattaaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 attagcagagttcccgcggctccttaagcaatgttgatgggcccttgtctttcattaaac 382
Query: 184 tgcctgagagtcaatcccttgatggatcccagagggaaaatcaaggaggaaagagtttat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgcctgagagtcaatcccttgatggatcccagagggaaaatcaaggaggaaagagtttat 442
Query: 244 tatcagacatagtctaagggcaaccaacttatgacttacctaaaaaaaaa-tgataatta 302
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 443 tatcagacatagtctaagggcaaccaacttaagacttacctaaaaaaaaaatgataatta 502
Query: 303 aatatttctccaaggagcaaattaagacaaataccctaagagtcattccatatagatatg 362
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 aatatttctccaaggagcaaattaagataaataccctaagagtcattccatatagatatg 562
Query: 363 tctagaaaaatgtccaattagcataatatataccacatttcaagggcctgggggactctt 422
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tctagaaaaatgtccaattagtataatatataccacatttcaagggcctgggggactctt 622
Query: 423 tttttttt-ctttttaaagaaaaaaatcattgttgatactccaaggttccaaggaacttt 481
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 623 tttttttttctttttaaagaaaaaaatcattgttgatactccaaggttctaaggaatttt 682
Query: 482 tttttctcttcctttttctttttacacgct 511
|||||||||| |||||||||||||||||||
Sbjct: 683 tttttctctttctttttctttttacacgct 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_l16.g1 MSMg01no099_l16.g1 CHROMAT_FILE:
MSMg01no099_l16.g1 PHD_FILE: MSMg01no099_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:21 2005
(469 letters)
>mm_chr13_98784731_98785597
Length = 867
Score = 845 bits (437), Expect = 0.0
Identities = 461/469 (98%), Gaps = 2/469 (0%)
Strand = Plus / Minus
Query: 1 tatttaatgattttgtagttattgtaaggaaagggtttgaataaggtgatttcaacgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatttaatgattttgtagttattgtaaggaaagggtttgaataaggtgatttcaacgaga 608
Query: 61 aagtctctagagaacccagcgaccaattctgcttacctcgagcaataacaagaagatcag 120
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 607 aagtctctagagaacccagagaccaattctgcttacctcgagtaataacaagaagatcag 548
Query: 121 cctgaaggaaggaggccctgggaccctggtggctcacagaggaagagacttgcttggtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cctgaaggaaggaggccctgggaccctggtggctcacagaggaagagacttgcttggtct 488
Query: 181 attccctcttgcttcttgggctctcactgtaggtatcacagggactgttctctgggaaga 240
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 487 attccctcttgcttcttgggccctcactgta-gtatcacagggactgttctctgggaaga 429
Query: 241 gactctcctcacctgggctgggtattgcaggaggccattgttgtcttctgaggcttaaca 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 gactctcc-cacctgggctgggtattgcaggaggccattgttgtcttctgaggcttaaaa 370
Query: 301 caaagccagagagttagtggacagccctttccattccttgtcttgcatagagacatgtgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 369 caaagccagagagttagtggacagccctttccattccttgtcttgcatagagacgtgtgt 310
Query: 361 ggtcatgcctctaactccagggggaggggacatggaaagtggcaggagaagcgtttctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 309 ggtcatgcctctaactccagggggaggggacatggaaagtggcaggagaagtgtttctcc 250
Query: 421 taatgtttttgacttctggagcctgtcggcactgtacagccgtgatgtc 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 taatgtttttgacttctggagcctgtcggcactgtacagccgtgatgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 867
Length adjustment: 10
Effective length of query: 459
Effective length of database: 857
Effective search space: 393363
Effective search space used: 393363
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
