Query= MSMg01no099_m04.b1 MSMg01no099_m04.b1 CHROMAT_FILE:
MSMg01no099_m04.b1 PHD_FILE: MSMg01no099_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:23 2005
(593 letters)
>mm_chr13_5051931_5052923
Length = 993
Score = 1075 bits (556), Expect = 0.0
Identities = 574/580 (98%)
Strand = Plus / Plus
Query: 5 gaattctgcaactaaactatctcacatagaacagttcttcacttctctgaacctttgccc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcaactaaattatctcacatagaacagttcttcacttctctgaacctttgccc 264
Query: 65 tctttcctatttgcaagtggcacaaaaagttgccagtggcttttgttccttttatttcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctttcctatttgcaagtggcacaaaaagttgccagtggcttttgttccttttatttcag 324
Query: 125 tgtgttttataactctgaggctctatatttgtcttcatcaccaacctgaaatacattaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgttttataactctgaggctctatatttgtcttcatcaccaacctgaaatacattaac 384
Query: 185 aatttcattttaatatatgccttggatcccagcaggtataggatgaaattaatacgatga 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 aatttcattttaatatatgccttggatcccagcaggtataggatgaaattaatacgataa 444
Query: 245 aaagtaaaatcatataaagaagtctattcaaaccattttagtccagactaaagacgttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagtaaaatcatataaagaagtctattcaaaccattttagtccagactaaagacgttgc 504
Query: 305 tctcctcatacaaatgctaggttgaattaggtttaatatagaatgaaacagcatggcaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctcctcatacaaatgctaggttgaattaggtttaatatagaatgaaacagcatggcaca 564
Query: 365 cttggccatataactgatgagaataaattcctagtggaaaagaaaatatttacccatcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttggccatataactgatgagaataaattcctagtggaaaagaaaatatttacccatcta 624
Query: 425 ttatacatgaagattgtggaatgaaaaataatgagagagataaatgcttgaatgttcttg 484
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 ttacacatgaagattgtggaatgaaaaataatgagacagataaatgcttgaatgttcttg 684
Query: 485 ggcttgtactgagttcctatgggttaaggtctctctctctctgtctctgcctctgtctct 544
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 ggcttgtactgagttcctatgggttaaggtctctctctctctgtctctgtctctgtctct 744
Query: 545 ctctgtctctgtctgtctctctctctgtctctctctctct 584
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 745 ctctgtctctgtctgtctctctgtctgtctctctctctct 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_m04.g1 MSMg01no099_m04.g1 CHROMAT_FILE:
MSMg01no099_m04.g1 PHD_FILE: MSMg01no099_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:23 2005
(592 letters)
>mm_chr13_5169010_5170001
Length = 992
Score = 1083 bits (560), Expect = 0.0
Identities = 584/592 (98%)
Strand = Plus / Minus
Query: 1 atttaatgctctcaactaagtttctcttgatcattgtattgcacacagttgcatggaata 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 973 atttaatgctctcaactaagtttctcttgatcattgtattgcaaacagttgcatggatta 914
Query: 61 acagaactaagcaatattaatggaatagaaccaactcaaatgtccaccaacagaacagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 acagaactaagcaatattaatggaatagaaccaactcaaatgtccaccaacagaacagat 854
Query: 121 tatgaaaacgtgacaaatcaacataatggaattttgtttatgtgcatataaaaaggaaaa 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tatgaaaatgtgacaaatcaacataatggaattttgtttatgtgcatataaaaaggaaaa 794
Query: 181 tgtataaaacttaaaggtattatatgagtgaatgacccaatctcagacagacaaaaatat 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cgtataaaacttaaaagtattatatgagtgaatgacccaatctcagacagacaaaaatat 734
Query: 241 cttgttttctatcaaatttggattctaacttctaatgtttgtgtgtatattaataagggc 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 733 cttgttttctatcaaatttggatcctaacttctaatgtttgtgtgtatattaataagggc 674
Query: 301 ttgtataattttatgtagactatgatatagacaaccagaagaggaaaacaaaacaaattt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttgtataattttatgtagactatgatatagacaaccagaagaggaaaacaaaacaaattc 614
Query: 361 ggaaaagagaaggggatgccacatgaaaggagaatgcttggggagggaaggagccctgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggaaaagagaaggggatgccacatgaaaggagaatgcttggggagggaaggagccctgga 554
Query: 421 aaataaccactattgtgttgttgggacattctggctcaaagtaaaatgtgaacattttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaataaccactattgtgttgttgggacattctggctcaaagtaaaatgtgaacattttat 494
Query: 481 tcaatgtagtaactgatcgaatacaagcaaaagaggtatgaagcacattccctgtaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcaatgtagtaactgatcgaatacaagcaaaagaggtatgaagcacattccctgtaatgt 434
Query: 541 gtgcagttaagtgaatgctcacaagaaatagtgcacagcaacagaacattca 592
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 433 gtgcagttaagtgaatgctcacaagaaataatgcacagcaacagaacattca 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
