Query= MSMg01no102_e01.b1 MSMg01no102_e01.b1 CHROMAT_FILE:
MSMg01no102_e01.b1 PHD_FILE: MSMg01no102_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:47 2005
(484 letters)
>mm_chr13_70908425_70909308
Length = 884
Score = 905 bits (468), Expect = 0.0
Identities = 477/480 (99%)
Strand = Plus / Plus
Query: 5 gaattctcattcatgccttcatccactcagcaccccaagagcacagctgccttctgagca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcattcatgccttcatccactcagcaccccaagagcacagctgccttctgagca 264
Query: 65 ctccaccaacttcctgaagccactgtgctctgctcccagcacccttgttccaatgcaccc 124
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 ccccaccaacttcctgaagccactgtgctctgctcctagcacccttgttccaatgcaccc 324
Query: 125 tttgaaatagagctcagatggggatgttcccgcctcctaggtgcccacaaatgctccaga 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgaaatagagctcagatgaggatgttcccgcctcctaggtgcccacaaatgctccaga 384
Query: 185 cccgcatctgagaatcagctctcccctctgcacatgctccgtacacacctccatcacaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccgcatctgagaatcagctctcccctctgcacatgctccgtacacacctccatcacaaa 444
Query: 245 gcagtgccatcaacatgagctcttctggctttctccccctgggctgggacttggagggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagtgccatcaacatgagctcttctggctttctccccctgggctgggacttggagggga 504
Query: 305 agggctcctttcatatgtctggctttctagccctcacgggatgcctggcacaaagcagac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agggctcctttcatatgtctggctttctagccctcacgggatgcctggcacaaagcagac 564
Query: 365 tgtctggagacgtttgttgaatgaataagcggtcgttattacctcacacatcccatctat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtctggagacgtttgttgaatgaataagcggtcgttattacctcacacatcccatctat 624
Query: 425 acaaacattacggctatcctccgagcatggagtcccatctttcactttatttgacaaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaaacattacggctatcctccgagcatggagtcccatctttcactttatttgacaaaga 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_e01.g1 MSMg01no102_e01.g1 CHROMAT_FILE:
MSMg01no102_e01.g1 PHD_FILE: MSMg01no102_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:47 2005
(530 letters)
>mm_chr13_71049513_71050444
Length = 932
Score = 824 bits (426), Expect = 0.0
Identities = 451/466 (96%), Gaps = 12/466 (2%)
Strand = Plus / Minus
Query: 77 gcaagactggtcctcggcagtggacatgagtaacccacggcactgttatctcccaaagag 136
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 932 gcaagactggtcctcggcagtggacatgggtaacccacggcactgttatctcccaaagag 873
Query: 137 tgctgaactatggttagtaaggcagaactgtcaccttctgctttcaatggtatctcataa 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tgctgaactatggttagtaaggcagaactgtcaccttctgctttcaatggtatctcataa 813
Query: 197 ctcttacctttctttgttaaaac----------agagagagacagagagagagagagaga 246
||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 812 ctcttacctttctttgttaaaacagagagagagagagagagagagagagagagagagaga 753
Query: 247 gagagagagagagagagagaatttactatcctctccaattgaacatcatttttcccatac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gagagagagagagagagagaatttactatcctctccaattgaacatcatttttcccatac 693
Query: 307 accatgttttcttttatcacac--ttttttttgctttacccaaaagcaattaatgttcct 364
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 692 accatgttttcttttatcacacttttttttttgttttacccaaaagcaattaatgttcct 633
Query: 365 ttcttgtggaagtaatttttagaagccagcaattaccatgcacagctcctttgttaattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttcttgtggaagtaatttttagaagccagcaattaccatgcacagctcctttgttaattg 573
Query: 425 tccatagacattttcatcaggctttcaggacccatgctgccctaattcagaggctggacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tccatagacattttcatcaggctttcaggacccatgctgccctaattcagaggctggacc 513
Query: 485 tgggacaagcattacctcatcatcattacctcaagcacttctgtag 530
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgggacaagcattacctcatcatcattacctcaagcacttctgtag 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 932
Length adjustment: 10
Effective length of query: 520
Effective length of database: 922
Effective search space: 479440
Effective search space used: 479440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
