| Query= MSMg01no105_o23.g1 MSMg01no105_o23.g1 CHROMAT_FILE:
MSMg01no105_o23.g1 PHD_FILE: MSMg01no105_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:43 2005
(346 letters)
>mm_chr13_44006807_44007554
Length = 748
Score = 642 bits (332), Expect = 0.0
Identities = 345/352 (98%), Gaps = 6/352 (1%)
Strand = Plus / Plus
Query: 1 tgtaagcattcaacatttattaaacttgatctttttttttt--aatctaagaaaacctca 58
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Sbjct: 201 tgtaagcattcaacatttattaaacttgatcttttttttttttaatctaagaaaacctca 260
Query: 59 aggtgactcaagcccagatgattccattagtgaatgttttccagagtttaataaacacat 118
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Sbjct: 261 aggtgactcaagcccagatgattccattagtgaatgttttccagagtttaataaacacat 320
Query: 119 tacatgatcatatacaattgtttcagagagtaagaaatcaaaagatattttaaagaattt 178
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Sbjct: 321 tacatgatcatatacaattgtttcagagagtaagaaatcaaaagatattttaaagaattt 380
Query: 179 tattaggttagttataatcctaagggcactgaagtaagggcactgtaagacacagtctac 238
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Sbjct: 381 tattaggttagttataatcctaagggcactgaagtaagggcactgtaagacacagtctac 440
Query: 239 agggagatcactttaaatatatatatatatatatatatatatatatatatatatat---- 294
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Sbjct: 441 agggagataactttaaatatatatatatatatatatatatatatatatatatatatatat 500
Query: 295 gttgaagtgttagcaaattaattccaaaataaaatgcatttgatttgtgata 346
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Sbjct: 501 gttgaagtgttagcaaattaattccaaaataaaatgcatttgatttgtgata 552
Score = 80.0 bits (41), Expect = 2e-19
Identities = 47/49 (95%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 247 cactttaa-atatatatatatatatatatatatatatatatatatatat 294
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Sbjct: 509 cacttcaacatatatatatatatatatatatatatatatatatatatat 461
Score = 78.1 bits (40), Expect = 8e-19
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 255 atatatatatatatatatatatatatatatatatatatat 294
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Sbjct: 496 atatatatatatatatatatatatatatatatatatatat 457
Score = 78.1 bits (40), Expect = 8e-19
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 255 atatatatatatatatatatatatatatatatatatatat 294
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Sbjct: 498 atatatatatatatatatatatatatatatatatatatat 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 7
Length of query: 346
Length of database: 748
Length adjustment: 9
Effective length of query: 337
Effective length of database: 739
Effective search space: 249043
Effective search space used: 249043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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