ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTACCTCAGAGCCCCATTTTTAATGGGGTAATTTGATTTT
TCTGGAGTCCACTTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTAGAATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT
TTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTAT
GAGGTCCCATTTGTCAATTCTCAATCTTACAGCACAAGCCATTGCTATTC
TATTCATGAATTTTTCCCCTGTACCCATATCTTTGCTGCTTTTCCCTACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAAT
CCACTTAGATTTGACCTTAGTACAAGGACATAGGAATGGATCAATTTGCA
TTCTTCTACATGATAGCCACCAGTTGTGCCAGCACCATTTGGTGAAGATG
CTGTCTTTTTTCCACTGGATGGTTTTTGCTCCCTTGTCAAAGATCAAGTG
ACCATAGGTATGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCGCTATACCAGTACCTGCTGTTTTTATCACAATTACTC
TGTAGTAGAGCTTTAGATCAGGGATGGTGATTCCACCAGAGGTTTTTTTA
TCCTTGAG

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAAGTTTGTTGGCTTCAAGGATTTTC
TATGATGTTGGAACACTGGTGGAGGTTTAGCTATGTCAGAATTCAATCTT
TAAAGGCATTTATAATAAAGTAATACTAAAAGAGAACACGTGGATCCTTA
CACCAGACTAACACAGGGATAGGATATGAGTATATGGGTTATGAGAATGC
CTGGTTCCAGGAGGTTGAGTATCCTTGAAACTCCCTGCCTCGTGAGTGCT
TCCAGGACTCTCGGCCTGCTGAGCAGACTTACTGGAGTGTGTGCAGCACT
CAGCTTGCTTTCTTCTCTTCTGTCAGTTTGGGACCCCAGCCCATGGGAGG
ATATCATGACATTTTGAGTCTATCTTCCCTCTTCTGTTAGACCTATCTGG
AAACACCCTCAAGAGGCATAAACCCCTTGCAAATTTAAGCTATCAGAAAT
AAATACCACTCACTACACTTACCTGCTTAGCATCCTTGCTTAGAGATGCC
TGTTACTGTAGAGTCTTGTTTTCCCCTTTGAGTAAGTGGCCAGGTGGGGT
TGACTCTCTTGGTGCATGGAATAACCAGAGAAAAATCATCGTGCACACAG
CCTGCCAAGAGACCGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTT
G

Query= MSMg01no108_m05.g1 MSMg01no108_m05.g1 CHROMAT_FILE:
MSMg01no108_m05.g1 PHD_FILE: MSMg01no108_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:44 2005
         (613 letters)



>mm_chr13_25509682_25510694
          Length = 1013

 Score = 1154 bits (597), Expect = 0.0
 Identities = 609/613 (99%), Gaps = 2/613 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagtttgttggcttcaaggattttctatgatgttggaacactggtggaggtttagctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 caagtttgttggcttcaaggattttctatgatgttggaacactggtggaggtttagctat 259

                                                                       
Query: 61  gtcagaattcaatctttaaaggcatttataataaagtaatactaaaagagaacacgtgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtcagaattcaatctttaaaggcatttataataaagtaatactaaaagagaacacgtgga 319

                                                                       
Query: 121 tccttacaccagactaacacagggataggatatgagtatatgggttatgagaatgcctgg 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 tccttacaccagactaacacagggatagggtatgagtatatgggttatgagaatgcctgg 379

                                                                       
Query: 181 ttccaggaggttgagtatccttgaaactccctgcctcgtgagtgcttccaggactctcgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttccaggaggttgagtatccttgaaactccctgcctcgtgagtgcttccaggactctcgg 439

                                                                       
Query: 241 cctgctgagcagactt-actggagtgtgtgcagcactcagcttgctttcttctcttctgt 299
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctgctgagcagacttcactggagtgtgtgcagcactcagcttgctttcttctcttctgt 499

                                                                       
Query: 300 cagtttgggaccccagcccatgggaggatatcatgacattttgagtctatcttccctctt 359
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 500 cagtttgggaccccagcccatgggaggataccatgacattttgagtctatcttccctctt 559

                                                                       
Query: 360 ctgttagacctatctggaaacaccctcaagaggcataaaccccttgcaaatttaagctat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgttagacctatctggaaacaccctcaagaggcataaaccccttgcaaatttaagctat 619

                                                                       
Query: 420 cagaaataaataccactcactacacttacctgcttagcatccttgcttagagatgcctgt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagaaataaataccactcactacacttacctgcttagcatccttgcttagagatgcctgt 679

                                                                       
Query: 480 tactgtagagtcttgttttcccctttgagtaagtggccaggtggggttgactctcttggt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tactgtagagtcttgttttcccctttgagtaagtggccaggtggggttgactctcttggt 739

                                                                       
Query: 540 gcatggaataaccagagaaaaatcatcgtgcacacagcctgccaagagaccgtttgttgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcatggaataaccagagaaaaatcatcgtgcacacagcctgccaagagaccgtttgttgt 799

                        
Query: 600 tgttgttgttgtt 612
           ||||||| |||||
Sbjct: 800 tgttgtt-ttgtt 811


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)